Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A3O75365 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.44■□□□□ 0.54
PTP4A3O75365 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A3O75365 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A3O75365 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A3O75365 AC091799.1-201ENST00000422823 811 ntBASIC18.44■□□□□ 0.54
PTP4A3O75365 YBX1P1-201ENST00000445822 960 ntBASIC18.44■□□□□ 0.54
PTP4A3O75365 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.44■□□□□ 0.54
PTP4A3O75365 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.44■□□□□ 0.54
PTP4A3O75365 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.44■□□□□ 0.54
PTP4A3O75365 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.44■□□□□ 0.54
PTP4A3O75365 AC243732.1-201ENST00000612648 864 ntBASIC18.44■□□□□ 0.54
PTP4A3O75365 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.44■□□□□ 0.54
PTP4A3O75365 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PTP4A3O75365 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PTP4A3O75365 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A3O75365 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A3O75365 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A3O75365 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A3O75365 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A3O75365 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A3O75365 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.43■□□□□ 0.54
PTP4A3O75365 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A3O75365 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
PTP4A3O75365 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A3O75365 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A3O75365 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTP4A3O75365 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.43■□□□□ 0.54
PTP4A3O75365 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A3O75365 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.43■□□□□ 0.54
PTP4A3O75365 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PTP4A3O75365 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.43■□□□□ 0.54
PTP4A3O75365 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A3O75365 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.43■□□□□ 0.54
PTP4A3O75365 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A3O75365 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A3O75365 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A3O75365 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.42■□□□□ 0.54
PTP4A3O75365 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A3O75365 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PTP4A3O75365 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A3O75365 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A3O75365 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A3O75365 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PTP4A3O75365 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.42■□□□□ 0.54
PTP4A3O75365 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PTP4A3O75365 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.42■□□□□ 0.54
PTP4A3O75365 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.42■□□□□ 0.54
PTP4A3O75365 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.42■□□□□ 0.54
PTP4A3O75365 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.42■□□□□ 0.54
PTP4A3O75365 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.42■□□□□ 0.54
PTP4A3O75365 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.42■□□□□ 0.54
PTP4A3O75365 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.42■□□□□ 0.54
PTP4A3O75365 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A3O75365 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A3O75365 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A3O75365 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.42■□□□□ 0.54
PTP4A3O75365 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A3O75365 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A3O75365 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.42■□□□□ 0.54
PTP4A3O75365 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.42■□□□□ 0.54
PTP4A3O75365 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PTP4A3O75365 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.42■□□□□ 0.54
PTP4A3O75365 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.41■□□□□ 0.54
PTP4A3O75365 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PTP4A3O75365 AC004854.2-201ENST00000608450 1441 ntBASIC18.41■□□□□ 0.54
PTP4A3O75365 RBM17P2-201ENST00000616397 1405 ntBASIC18.41■□□□□ 0.54
PTP4A3O75365 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A3O75365 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PTP4A3O75365 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A3O75365 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A3O75365 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A3O75365 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A3O75365 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A3O75365 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTP4A3O75365 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.41■□□□□ 0.54
PTP4A3O75365 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.41■□□□□ 0.54
PTP4A3O75365 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.41■□□□□ 0.54
PTP4A3O75365 KRT18P14-201ENST00000534205 1250 ntBASIC18.41■□□□□ 0.54
PTP4A3O75365 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.41■□□□□ 0.54
PTP4A3O75365 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.41■□□□□ 0.54
PTP4A3O75365 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PTP4A3O75365 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.41■□□□□ 0.54
PTP4A3O75365 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.41■□□□□ 0.54
PTP4A3O75365 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PTP4A3O75365 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A3O75365 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A3O75365 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
PTP4A3O75365 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A3O75365 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PTP4A3O75365 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A3O75365 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A3O75365 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.4■□□□□ 0.54
PTP4A3O75365 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.4■□□□□ 0.54
PTP4A3O75365 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.4■□□□□ 0.54
PTP4A3O75365 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A3O75365 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTP4A3O75365 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
PTP4A3O75365 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PTP4A3O75365 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms