Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 IGHV3-19-201ENST00000521488 291 ntBASIC15.87■□□□□ 0.13
ZNF253O75346 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.87■□□□□ 0.13
ZNF253O75346 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.87■□□□□ 0.13
ZNF253O75346 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
ZNF253O75346 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.87■□□□□ 0.13
ZNF253O75346 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ZNF253O75346 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.87■□□□□ 0.13
ZNF253O75346 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.87■□□□□ 0.13
ZNF253O75346 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.87■□□□□ 0.13
ZNF253O75346 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.87■□□□□ 0.13
ZNF253O75346 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.87■□□□□ 0.13
ZNF253O75346 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.87■□□□□ 0.13
ZNF253O75346 AC055733.4-201ENST00000638462 1354 ntBASIC15.87■□□□□ 0.13
ZNF253O75346 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF253O75346 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ZNF253O75346 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ZNF253O75346 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.86■□□□□ 0.13
ZNF253O75346 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.86■□□□□ 0.13
ZNF253O75346 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.86■□□□□ 0.13
ZNF253O75346 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.86■□□□□ 0.13
ZNF253O75346 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ZNF253O75346 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.86■□□□□ 0.13
ZNF253O75346 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
ZNF253O75346 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.86■□□□□ 0.13
ZNF253O75346 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ZNF253O75346 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
ZNF253O75346 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ZNF253O75346 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.86■□□□□ 0.13
ZNF253O75346 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF253O75346 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
ZNF253O75346 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.85■□□□□ 0.13
ZNF253O75346 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ZNF253O75346 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ZNF253O75346 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.85■□□□□ 0.13
ZNF253O75346 MIR4767-201ENST00000582827 78 ntBASIC15.85■□□□□ 0.13
ZNF253O75346 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
ZNF253O75346 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.85■□□□□ 0.13
ZNF253O75346 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 AP005212.1-201ENST00000581547 1997 ntBASIC15.85■□□□□ 0.13
ZNF253O75346 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF253O75346 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ZNF253O75346 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF253O75346 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF253O75346 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF253O75346 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.84■□□□□ 0.13
ZNF253O75346 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
ZNF253O75346 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF253O75346 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF253O75346 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
ZNF253O75346 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF253O75346 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
ZNF253O75346 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.84■□□□□ 0.13
ZNF253O75346 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
ZNF253O75346 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
ZNF253O75346 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
ZNF253O75346 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF253O75346 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF253O75346 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.84■□□□□ 0.13
ZNF253O75346 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.84■□□□□ 0.13
ZNF253O75346 AC121338.2-201ENST00000622535 1744 ntBASIC15.84■□□□□ 0.13
ZNF253O75346 AC026471.1-201ENST00000564629 3026 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms