Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH16O75309 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH16O75309 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH16O75309 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH16O75309 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDH16O75309 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH16O75309 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH16O75309 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH16O75309 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH16O75309 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH16O75309 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
CDH16O75309 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH16O75309 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.64■□□□□ 0.9
CDH16O75309 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH16O75309 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CDH16O75309 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH16O75309 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH16O75309 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CDH16O75309 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.64■□□□□ 0.89
CDH16O75309 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.64■□□□□ 0.89
CDH16O75309 EEF1DP3-203ENST00000566025 782 ntBASIC20.64■□□□□ 0.89
CDH16O75309 AC053503.5-201ENST00000601508 636 ntBASIC20.64■□□□□ 0.89
CDH16O75309 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.64■□□□□ 0.89
CDH16O75309 AC233992.3-201ENST00000607491 485 ntBASIC20.64■□□□□ 0.89
CDH16O75309 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CDH16O75309 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH16O75309 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH16O75309 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CDH16O75309 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDH16O75309 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH16O75309 AC125437.2-201ENST00000625180 2167 ntBASIC20.63■□□□□ 0.89
CDH16O75309 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH16O75309 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH16O75309 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH16O75309 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH16O75309 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH16O75309 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH16O75309 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH16O75309 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH16O75309 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH16O75309 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH16O75309 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH16O75309 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH16O75309 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH16O75309 AC061975.6-201ENST00000579045 1553 ntBASIC20.63■□□□□ 0.89
CDH16O75309 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH16O75309 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CDH16O75309 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDH16O75309 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CDH16O75309 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.62■□□□□ 0.89
CDH16O75309 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDH16O75309 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH16O75309 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.62■□□□□ 0.89
CDH16O75309 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.62■□□□□ 0.89
CDH16O75309 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH16O75309 AC126544.1-201ENST00000580842 1059 ntBASIC20.62■□□□□ 0.89
CDH16O75309 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH16O75309 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDH16O75309 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH16O75309 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CDH16O75309 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CDH16O75309 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH16O75309 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH16O75309 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH16O75309 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH16O75309 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.61■□□□□ 0.89
CDH16O75309 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH16O75309 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH16O75309 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH16O75309 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.6■□□□□ 0.89
CDH16O75309 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.6■□□□□ 0.89
CDH16O75309 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH16O75309 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH16O75309 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.6■□□□□ 0.89
CDH16O75309 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH16O75309 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms