Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CNOT3O75175 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CNOT3O75175 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.76■□□□□ 0.75
CNOT3O75175 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
CNOT3O75175 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.76■□□□□ 0.75
CNOT3O75175 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CNOT3O75175 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT3O75175 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.75■□□□□ 0.75
CNOT3O75175 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT3O75175 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT3O75175 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.75■□□□□ 0.75
CNOT3O75175 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT3O75175 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT3O75175 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT3O75175 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT3O75175 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT3O75175 AC098934.4-201ENST00000564127 592 ntBASIC19.75■□□□□ 0.75
CNOT3O75175 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.75■□□□□ 0.75
CNOT3O75175 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CNOT3O75175 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT3O75175 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CNOT3O75175 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.75■□□□□ 0.75
CNOT3O75175 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CNOT3O75175 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNOT3O75175 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT3O75175 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT3O75175 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT3O75175 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT3O75175 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.74■□□□□ 0.75
CNOT3O75175 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT3O75175 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CNOT3O75175 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT3O75175 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CNOT3O75175 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CNOT3O75175 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT3O75175 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CNOT3O75175 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 AC244015.2-201ENST00000616358 1861 ntBASIC19.73■□□□□ 0.75
CNOT3O75175 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.73■□□□□ 0.75
CNOT3O75175 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.73■□□□□ 0.75
CNOT3O75175 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CNOT3O75175 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 AC093787.1-201ENST00000450396 207 ntBASIC19.73■□□□□ 0.75
CNOT3O75175 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.73■□□□□ 0.75
CNOT3O75175 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.73■□□□□ 0.75
CNOT3O75175 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.73■□□□□ 0.75
CNOT3O75175 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.73■□□□□ 0.75
CNOT3O75175 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.73■□□□□ 0.75
CNOT3O75175 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.73■□□□□ 0.75
CNOT3O75175 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CNOT3O75175 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT3O75175 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CNOT3O75175 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT3O75175 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CNOT3O75175 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT3O75175 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CNOT3O75175 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.72■□□□□ 0.75
CNOT3O75175 SLC29A4P1-201ENST00000398760 971 ntBASIC19.72■□□□□ 0.75
CNOT3O75175 AC016405.3-201ENST00000607710 860 ntBASIC19.72■□□□□ 0.75
CNOT3O75175 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CNOT3O75175 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.72■□□□□ 0.75
CNOT3O75175 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CNOT3O75175 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CNOT3O75175 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT3O75175 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
CNOT3O75175 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.72■□□□□ 0.75
CNOT3O75175 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT3O75175 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT3O75175 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT3O75175 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT3O75175 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT3O75175 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT3O75175 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT3O75175 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT3O75175 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT3O75175 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT3O75175 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms