Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXD2O60548 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXD2O60548 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
FOXD2O60548 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXD2O60548 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.57■□□□□ 0.88
FOXD2O60548 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXD2O60548 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 MCRIP2P1-201ENST00000394346 511 ntBASIC20.57■□□□□ 0.88
FOXD2O60548 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXD2O60548 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXD2O60548 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 SOX15-203ENST00000570788 1093 ntBASIC20.57■□□□□ 0.88
FOXD2O60548 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
FOXD2O60548 AL049637.2-201ENST00000641778 930 ntBASIC20.57■□□□□ 0.88
FOXD2O60548 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.57■□□□□ 0.88
FOXD2O60548 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
FOXD2O60548 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
FOXD2O60548 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXD2O60548 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXD2O60548 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD2O60548 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD2O60548 AC087499.1-201ENST00000418141 1075 ntBASIC20.56■□□□□ 0.88
FOXD2O60548 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXD2O60548 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.56■□□□□ 0.88
FOXD2O60548 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD2O60548 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD2O60548 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXD2O60548 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD2O60548 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD2O60548 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD2O60548 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD2O60548 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD2O60548 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXD2O60548 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD2O60548 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD2O60548 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD2O60548 ANOS2P-203ENST00000472227 1816 ntBASIC20.55■□□□□ 0.88
FOXD2O60548 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD2O60548 PKD1P6-201ENST00000343738 4769 ntBASIC20.55■□□□□ 0.88
FOXD2O60548 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXD2O60548 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
FOXD2O60548 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD2O60548 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
FOXD2O60548 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD2O60548 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXD2O60548 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXD2O60548 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXD2O60548 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
FOXD2O60548 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
FOXD2O60548 AC012306.2-201ENST00000609350 630 ntBASIC20.55■□□□□ 0.88
FOXD2O60548 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
FOXD2O60548 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXD2O60548 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD2O60548 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXD2O60548 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.54■□□□□ 0.88
FOXD2O60548 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD2O60548 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXD2O60548 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
FOXD2O60548 AL355472.2-201ENST00000422958 438 ntBASIC20.54■□□□□ 0.88
FOXD2O60548 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.54■□□□□ 0.88
FOXD2O60548 AC133681.1-201ENST00000465482 601 ntBASIC20.54■□□□□ 0.88
FOXD2O60548 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXD2O60548 CD177P1-201ENST00000606252 935 ntBASIC20.54■□□□□ 0.88
FOXD2O60548 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD2O60548 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXD2O60548 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
FOXD2O60548 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
FOXD2O60548 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD2O60548 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXD2O60548 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD2O60548 TSPY7P-201ENST00000431358 1114 ntBASIC20.53■□□□□ 0.88
FOXD2O60548 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD2O60548 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD2O60548 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
FOXD2O60548 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD2O60548 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
FOXD2O60548 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD2O60548 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD2O60548 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD2O60548 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD2O60548 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXD2O60548 AL391422.3-201ENST00000603791 2761 ntBASIC20.52■□□□□ 0.88
FOXD2O60548 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
FOXD2O60548 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD2O60548 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.52■□□□□ 0.88
FOXD2O60548 RCN1P1-201ENST00000400413 996 ntBASIC20.52■□□□□ 0.88
FOXD2O60548 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.52■□□□□ 0.88
FOXD2O60548 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.52■□□□□ 0.88
FOXD2O60548 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD2O60548 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FOXD2O60548 AL445228.2-201ENST00000605589 952 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms