Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.35■□□□□ 0.69
URB1O60287 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
URB1O60287 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.34■□□□□ 0.69
URB1O60287 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
URB1O60287 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
URB1O60287 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
URB1O60287 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.34■□□□□ 0.69
URB1O60287 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.34■□□□□ 0.69
URB1O60287 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
URB1O60287 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.34■□□□□ 0.69
URB1O60287 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.34■□□□□ 0.69
URB1O60287 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.34■□□□□ 0.69
URB1O60287 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
URB1O60287 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.34■□□□□ 0.69
URB1O60287 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.34■□□□□ 0.69
URB1O60287 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.34■□□□□ 0.69
URB1O60287 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.34■□□□□ 0.69
URB1O60287 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
URB1O60287 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.33■□□□□ 0.69
URB1O60287 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
URB1O60287 AC137767.1-201ENST00000602918 1920 ntBASIC19.33■□□□□ 0.69
URB1O60287 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.33■□□□□ 0.69
URB1O60287 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
URB1O60287 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
URB1O60287 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
URB1O60287 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.33■□□□□ 0.68
URB1O60287 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.33■□□□□ 0.68
URB1O60287 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.33■□□□□ 0.68
URB1O60287 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
URB1O60287 AC026471.5-201ENST00000615068 467 ntBASIC19.33■□□□□ 0.68
URB1O60287 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
URB1O60287 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
URB1O60287 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.33■□□□□ 0.68
URB1O60287 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
URB1O60287 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
URB1O60287 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
URB1O60287 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
URB1O60287 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.33■□□□□ 0.68
URB1O60287 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
URB1O60287 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.32■□□□□ 0.68
URB1O60287 AC105020.6-201ENST00000621523 1217 ntBASIC19.32■□□□□ 0.68
URB1O60287 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
URB1O60287 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
URB1O60287 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
URB1O60287 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
URB1O60287 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.32■□□□□ 0.68
URB1O60287 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
URB1O60287 AL355355.2-201ENST00000442321 338 ntBASIC19.32■□□□□ 0.68
URB1O60287 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.32■□□□□ 0.68
URB1O60287 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
URB1O60287 NUDT16P1-203ENST00000513809 620 ntBASIC19.32■□□□□ 0.68
URB1O60287 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
URB1O60287 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.32■□□□□ 0.68
URB1O60287 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
URB1O60287 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.32■□□□□ 0.68
URB1O60287 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
URB1O60287 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.32■□□□□ 0.68
URB1O60287 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.31■□□□□ 0.68
URB1O60287 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.31■□□□□ 0.68
URB1O60287 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.31■□□□□ 0.68
URB1O60287 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.31■□□□□ 0.68
URB1O60287 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
URB1O60287 AC003102.1-202ENST00000563394 1796 ntBASIC19.31■□□□□ 0.68
URB1O60287 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
URB1O60287 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.31■□□□□ 0.68
URB1O60287 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.31■□□□□ 0.68
URB1O60287 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
URB1O60287 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
URB1O60287 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
URB1O60287 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.3■□□□□ 0.68
URB1O60287 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
URB1O60287 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms