Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH7O60245 AL121603.2-201ENST00000557373 2117 ntBASIC19.54■□□□□ 0.72
PCDH7O60245 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH7O60245 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDH7O60245 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDH7O60245 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCDH7O60245 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDH7O60245 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDH7O60245 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH7O60245 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDH7O60245 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PCDH7O60245 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PCDH7O60245 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH7O60245 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH7O60245 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDH7O60245 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH7O60245 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH7O60245 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PCDH7O60245 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH7O60245 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDH7O60245 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDH7O60245 AC007322.3-201ENST00000426526 701 ntBASIC19.53■□□□□ 0.72
PCDH7O60245 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PCDH7O60245 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDH7O60245 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH7O60245 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDH7O60245 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDH7O60245 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH7O60245 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH7O60245 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH7O60245 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH7O60245 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDH7O60245 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH7O60245 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH7O60245 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH7O60245 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDH7O60245 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PCDH7O60245 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDH7O60245 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH7O60245 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDH7O60245 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH7O60245 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PCDH7O60245 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH7O60245 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH7O60245 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH7O60245 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH7O60245 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDH7O60245 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDH7O60245 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH7O60245 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.52■□□□□ 0.72
PCDH7O60245 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDH7O60245 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH7O60245 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH7O60245 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH7O60245 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDH7O60245 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH7O60245 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDH7O60245 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH7O60245 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH7O60245 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH7O60245 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH7O60245 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCDH7O60245 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH7O60245 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH7O60245 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PCDH7O60245 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH7O60245 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
PCDH7O60245 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH7O60245 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH7O60245 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH7O60245 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PCDH7O60245 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH7O60245 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH7O60245 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PCDH7O60245 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDH7O60245 MIR2861-201ENST00000636310 90 ntBASIC19.51■□□□□ 0.71
PCDH7O60245 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH7O60245 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH7O60245 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH7O60245 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.51■□□□□ 0.71
PCDH7O60245 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH7O60245 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH7O60245 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
PCDH7O60245 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH7O60245 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH7O60245 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDH7O60245 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDH7O60245 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH7O60245 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH7O60245 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCDH7O60245 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH7O60245 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
PCDH7O60245 AC092720.2-201ENST00000602388 1665 ntBASIC19.49■□□□□ 0.71
PCDH7O60245 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH7O60245 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH7O60245 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCDH7O60245 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms