Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PEX1O43933 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX1O43933 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PEX1O43933 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.88■□□□□ 0.77
PEX1O43933 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX1O43933 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX1O43933 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PEX1O43933 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX1O43933 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX1O43933 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX1O43933 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PEX1O43933 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PEX1O43933 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.87■□□□□ 0.77
PEX1O43933 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.87■□□□□ 0.77
PEX1O43933 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.87■□□□□ 0.77
PEX1O43933 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.87■□□□□ 0.77
PEX1O43933 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX1O43933 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX1O43933 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.87■□□□□ 0.77
PEX1O43933 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX1O43933 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PEX1O43933 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX1O43933 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.87■□□□□ 0.77
PEX1O43933 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX1O43933 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
PEX1O43933 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX1O43933 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PEX1O43933 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PEX1O43933 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX1O43933 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX1O43933 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX1O43933 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX1O43933 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PEX1O43933 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.86■□□□□ 0.77
PEX1O43933 TPRG1LP1-201ENST00000598702 760 ntBASIC19.86■□□□□ 0.77
PEX1O43933 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PEX1O43933 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX1O43933 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PEX1O43933 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PEX1O43933 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX1O43933 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX1O43933 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PEX1O43933 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.85■□□□□ 0.77
PEX1O43933 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.85■□□□□ 0.77
PEX1O43933 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.85■□□□□ 0.77
PEX1O43933 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 IKBKGP1-201ENST00000612193 1073 ntBASIC19.85■□□□□ 0.77
PEX1O43933 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PEX1O43933 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PEX1O43933 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.85■□□□□ 0.77
PEX1O43933 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PEX1O43933 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
PEX1O43933 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX1O43933 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PEX1O43933 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PEX1O43933 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX1O43933 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PEX1O43933 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.84■□□□□ 0.77
PEX1O43933 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PEX1O43933 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PEX1O43933 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.84■□□□□ 0.77
PEX1O43933 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.84■□□□□ 0.77
PEX1O43933 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.84■□□□□ 0.77
PEX1O43933 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.84■□□□□ 0.77
PEX1O43933 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.84■□□□□ 0.77
PEX1O43933 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PEX1O43933 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.83■□□□□ 0.77
PEX1O43933 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PEX1O43933 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PEX1O43933 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.83■□□□□ 0.77
PEX1O43933 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.83■□□□□ 0.77
PEX1O43933 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PEX1O43933 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.83■□□□□ 0.77
PEX1O43933 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PEX1O43933 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PEX1O43933 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PEX1O43933 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PEX1O43933 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PEX1O43933 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PEX1O43933 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.83■□□□□ 0.76
PEX1O43933 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PEX1O43933 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PEX1O43933 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PEX1O43933 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.76
PEX1O43933 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX1O43933 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PEX1O43933 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PEX1O43933 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX1O43933 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms