Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL13O43927 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL13O43927 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CXCL13O43927 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CXCL13O43927 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL13O43927 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.34■□□□□ 0.53
CXCL13O43927 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL13O43927 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL13O43927 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL13O43927 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL13O43927 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.34■□□□□ 0.53
CXCL13O43927 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL13O43927 AC092118.2-201ENST00000613495 667 ntBASIC18.34■□□□□ 0.53
CXCL13O43927 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.34■□□□□ 0.53
CXCL13O43927 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.34■□□□□ 0.53
CXCL13O43927 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL13O43927 AC027702.1-201ENST00000563810 1770 ntBASIC18.34■□□□□ 0.53
CXCL13O43927 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.34■□□□□ 0.53
CXCL13O43927 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CXCL13O43927 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.33■□□□□ 0.53
CXCL13O43927 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.33■□□□□ 0.53
CXCL13O43927 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.33■□□□□ 0.53
CXCL13O43927 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL13O43927 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL13O43927 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL13O43927 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
CXCL13O43927 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.33■□□□□ 0.53
CXCL13O43927 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL13O43927 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CXCL13O43927 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL13O43927 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL13O43927 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL13O43927 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.33■□□□□ 0.52
CXCL13O43927 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.33■□□□□ 0.52
CXCL13O43927 AC069152.1-201ENST00000438030 544 ntBASIC18.33■□□□□ 0.52
CXCL13O43927 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.33■□□□□ 0.52
CXCL13O43927 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.33■□□□□ 0.52
CXCL13O43927 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.33■□□□□ 0.52
CXCL13O43927 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CXCL13O43927 AL589743.5-201ENST00000616611 1050 ntBASIC18.33■□□□□ 0.52
CXCL13O43927 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.33■□□□□ 0.52
CXCL13O43927 AC133041.1-202ENST00000642053 222 ntBASIC18.33■□□□□ 0.52
CXCL13O43927 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCL13O43927 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.33■□□□□ 0.52
CXCL13O43927 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL13O43927 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL13O43927 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CXCL13O43927 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCL13O43927 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
CXCL13O43927 AC087633.2-202ENST00000565166 1439 ntBASIC18.32■□□□□ 0.52
CXCL13O43927 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CXCL13O43927 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CXCL13O43927 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CXCL13O43927 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CXCL13O43927 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.32■□□□□ 0.52
CXCL13O43927 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.32■□□□□ 0.52
CXCL13O43927 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.32■□□□□ 0.52
CXCL13O43927 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.32■□□□□ 0.52
CXCL13O43927 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.32■□□□□ 0.52
CXCL13O43927 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
CXCL13O43927 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CXCL13O43927 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CXCL13O43927 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CXCL13O43927 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.31■□□□□ 0.52
CXCL13O43927 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL13O43927 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL13O43927 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL13O43927 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL13O43927 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL13O43927 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL13O43927 PGM5P4-201ENST00000421970 445 ntBASIC18.31■□□□□ 0.52
CXCL13O43927 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL13O43927 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.31■□□□□ 0.52
CXCL13O43927 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL13O43927 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.31■□□□□ 0.52
CXCL13O43927 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL13O43927 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL13O43927 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL13O43927 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL13O43927 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL13O43927 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CXCL13O43927 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL13O43927 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CXCL13O43927 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.3■□□□□ 0.52
CXCL13O43927 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL13O43927 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL13O43927 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL13O43927 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms