Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.43■■□□□ 1.82
KCNQ3O43525 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KCNQ3O43525 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
KCNQ3O43525 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNQ3O43525 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNQ3O43525 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNQ3O43525 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNQ3O43525 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
KCNQ3O43525 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.42■■□□□ 1.82
KCNQ3O43525 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
KCNQ3O43525 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
KCNQ3O43525 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.42■■□□□ 1.82
KCNQ3O43525 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
KCNQ3O43525 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.42■■□□□ 1.82
KCNQ3O43525 RN7SL471P-201ENST00000580476 299 ntBASIC26.42■■□□□ 1.82
KCNQ3O43525 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
KCNQ3O43525 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
KCNQ3O43525 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
KCNQ3O43525 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
KCNQ3O43525 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
KCNQ3O43525 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.41■■□□□ 1.82
KCNQ3O43525 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
KCNQ3O43525 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.41■■□□□ 1.82
KCNQ3O43525 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
KCNQ3O43525 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
KCNQ3O43525 AC011484.1-201ENST00000377652 1995 ntBASIC26.41■■□□□ 1.82
KCNQ3O43525 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.41■■□□□ 1.82
KCNQ3O43525 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
KCNQ3O43525 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.41■■□□□ 1.82
KCNQ3O43525 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.41■■□□□ 1.82
KCNQ3O43525 AC069544.1-201ENST00000609399 999 ntBASIC26.41■■□□□ 1.82
KCNQ3O43525 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KCNQ3O43525 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.41■■□□□ 1.82
KCNQ3O43525 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.41■■□□□ 1.82
KCNQ3O43525 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.41■■□□□ 1.82
KCNQ3O43525 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
KCNQ3O43525 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
KCNQ3O43525 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
KCNQ3O43525 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.4■■□□□ 1.82
KCNQ3O43525 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
KCNQ3O43525 C1QBPP2-201ENST00000528754 825 ntBASIC26.4■■□□□ 1.82
KCNQ3O43525 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KCNQ3O43525 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.4■■□□□ 1.82
KCNQ3O43525 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.4■■□□□ 1.82
KCNQ3O43525 AC006557.6-201ENST00000623071 864 ntBASIC26.4■■□□□ 1.82
KCNQ3O43525 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KCNQ3O43525 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KCNQ3O43525 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
KCNQ3O43525 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
KCNQ3O43525 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KCNQ3O43525 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
KCNQ3O43525 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
KCNQ3O43525 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
KCNQ3O43525 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KCNQ3O43525 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KCNQ3O43525 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
KCNQ3O43525 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
KCNQ3O43525 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.39■■□□□ 1.82
KCNQ3O43525 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
KCNQ3O43525 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
KCNQ3O43525 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
KCNQ3O43525 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
KCNQ3O43525 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.39■■□□□ 1.81
KCNQ3O43525 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.81
KCNQ3O43525 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.38■■□□□ 1.81
KCNQ3O43525 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNQ3O43525 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNQ3O43525 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
KCNQ3O43525 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.38■■□□□ 1.81
KCNQ3O43525 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNQ3O43525 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.38■■□□□ 1.81
KCNQ3O43525 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
KCNQ3O43525 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.38■■□□□ 1.81
KCNQ3O43525 KRT17P3-201ENST00000420566 1262 ntBASIC26.38■■□□□ 1.81
KCNQ3O43525 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KCNQ3O43525 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.38■■□□□ 1.81
KCNQ3O43525 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.38■■□□□ 1.81
KCNQ3O43525 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNQ3O43525 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNQ3O43525 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNQ3O43525 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNQ3O43525 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KCNQ3O43525 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.37■■□□□ 1.81
KCNQ3O43525 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
KCNQ3O43525 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNQ3O43525 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KCNQ3O43525 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNQ3O43525 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KCNQ3O43525 POM121L13P-201ENST00000422362 380 ntBASIC26.37■■□□□ 1.81
KCNQ3O43525 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.37■■□□□ 1.81
KCNQ3O43525 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KCNQ3O43525 RPS2P4-201ENST00000476944 856 ntBASIC26.37■■□□□ 1.81
KCNQ3O43525 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNQ3O43525 AP006294.2-201ENST00000641667 209 ntBASIC26.37■■□□□ 1.81
KCNQ3O43525 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.37■■□□□ 1.81
KCNQ3O43525 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KCNQ3O43525 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KCNQ3O43525 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
KCNQ3O43525 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
KCNQ3O43525 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms