Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.67■□□□□ 0.9
HTRA2O43464 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.67■□□□□ 0.9
HTRA2O43464 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.67■□□□□ 0.9
HTRA2O43464 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HTRA2O43464 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTRA2O43464 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HTRA2O43464 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTRA2O43464 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.66■□□□□ 0.9
HTRA2O43464 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.66■□□□□ 0.9
HTRA2O43464 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.66■□□□□ 0.9
HTRA2O43464 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.66■□□□□ 0.9
HTRA2O43464 AC142086.2-201ENST00000569753 217 ntBASIC20.66■□□□□ 0.9
HTRA2O43464 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.66■□□□□ 0.9
HTRA2O43464 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.66■□□□□ 0.9
HTRA2O43464 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.66■□□□□ 0.9
HTRA2O43464 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
HTRA2O43464 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTRA2O43464 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTRA2O43464 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTRA2O43464 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
HTRA2O43464 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HTRA2O43464 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTRA2O43464 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTRA2O43464 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.65■□□□□ 0.9
HTRA2O43464 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.65■□□□□ 0.9
HTRA2O43464 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.65■□□□□ 0.9
HTRA2O43464 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 SLC29A4P1-201ENST00000398760 971 ntBASIC20.65■□□□□ 0.9
HTRA2O43464 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.65■□□□□ 0.9
HTRA2O43464 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.65■□□□□ 0.9
HTRA2O43464 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.65■□□□□ 0.9
HTRA2O43464 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
HTRA2O43464 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.65■□□□□ 0.9
HTRA2O43464 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.65■□□□□ 0.9
HTRA2O43464 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA2O43464 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HTRA2O43464 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.64■□□□□ 0.9
HTRA2O43464 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
HTRA2O43464 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HTRA2O43464 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HTRA2O43464 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.64■□□□□ 0.9
HTRA2O43464 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA2O43464 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.64■□□□□ 0.89
HTRA2O43464 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA2O43464 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA2O43464 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA2O43464 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HTRA2O43464 MIPEPP3-201ENST00000412105 444 ntBASIC20.64■□□□□ 0.89
HTRA2O43464 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.64■□□□□ 0.89
HTRA2O43464 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.64■□□□□ 0.89
HTRA2O43464 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.64■□□□□ 0.89
HTRA2O43464 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HTRA2O43464 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.64■□□□□ 0.89
HTRA2O43464 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA2O43464 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA2O43464 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
HTRA2O43464 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA2O43464 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.64■□□□□ 0.89
HTRA2O43464 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.64■□□□□ 0.89
HTRA2O43464 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HTRA2O43464 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA2O43464 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA2O43464 AC087633.2-202ENST00000565166 1439 ntBASIC20.63■□□□□ 0.89
HTRA2O43464 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA2O43464 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA2O43464 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA2O43464 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HTRA2O43464 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.63■□□□□ 0.89
HTRA2O43464 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HTRA2O43464 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA2O43464 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HTRA2O43464 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA2O43464 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HTRA2O43464 AL355472.2-201ENST00000422958 438 ntBASIC20.63■□□□□ 0.89
HTRA2O43464 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.63■□□□□ 0.89
HTRA2O43464 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.63■□□□□ 0.89
HTRA2O43464 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.63■□□□□ 0.89
HTRA2O43464 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA2O43464 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA2O43464 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.63■□□□□ 0.89
HTRA2O43464 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA2O43464 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA2O43464 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HTRA2O43464 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HTRA2O43464 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.62■□□□□ 0.89
HTRA2O43464 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HTRA2O43464 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.62■□□□□ 0.89
HTRA2O43464 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms