Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.79■□□□□ 0.92
RIPK2O43353 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RIPK2O43353 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RIPK2O43353 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RIPK2O43353 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RIPK2O43353 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIPK2O43353 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIPK2O43353 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.78■□□□□ 0.92
RIPK2O43353 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RIPK2O43353 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIPK2O43353 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RIPK2O43353 AL356441.2-201ENST00000443009 864 ntBASIC20.78■□□□□ 0.92
RIPK2O43353 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.78■□□□□ 0.92
RIPK2O43353 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.78■□□□□ 0.92
RIPK2O43353 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
RIPK2O43353 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RIPK2O43353 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RIPK2O43353 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RIPK2O43353 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RIPK2O43353 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.78■□□□□ 0.92
RIPK2O43353 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RIPK2O43353 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RIPK2O43353 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.78■□□□□ 0.92
RIPK2O43353 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.77■□□□□ 0.92
RIPK2O43353 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RIPK2O43353 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RIPK2O43353 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RIPK2O43353 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.77■□□□□ 0.92
RIPK2O43353 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.77■□□□□ 0.92
RIPK2O43353 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.77■□□□□ 0.92
RIPK2O43353 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.77■□□□□ 0.92
RIPK2O43353 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.77■□□□□ 0.92
RIPK2O43353 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIPK2O43353 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RIPK2O43353 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RIPK2O43353 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
RIPK2O43353 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RIPK2O43353 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.77■□□□□ 0.91
RIPK2O43353 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RIPK2O43353 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.76■□□□□ 0.91
RIPK2O43353 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RIPK2O43353 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.76■□□□□ 0.91
RIPK2O43353 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK2O43353 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK2O43353 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK2O43353 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK2O43353 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK2O43353 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIPK2O43353 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RIPK2O43353 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK2O43353 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK2O43353 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RIPK2O43353 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.75■□□□□ 0.91
RIPK2O43353 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RIPK2O43353 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK2O43353 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RIPK2O43353 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIPK2O43353 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK2O43353 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK2O43353 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.74■□□□□ 0.91
RIPK2O43353 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.74■□□□□ 0.91
RIPK2O43353 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK2O43353 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RIPK2O43353 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK2O43353 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.74■□□□□ 0.91
RIPK2O43353 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK2O43353 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK2O43353 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK2O43353 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.74■□□□□ 0.91
RIPK2O43353 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIPK2O43353 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIPK2O43353 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIPK2O43353 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIPK2O43353 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIPK2O43353 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.73■□□□□ 0.91
RIPK2O43353 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIPK2O43353 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.73■□□□□ 0.91
RIPK2O43353 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIPK2O43353 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.73■□□□□ 0.91
RIPK2O43353 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.73■□□□□ 0.91
RIPK2O43353 RARRES2P11-201ENST00000635158 484 ntBASIC20.73■□□□□ 0.91
RIPK2O43353 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIPK2O43353 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.73■□□□□ 0.91
RIPK2O43353 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIPK2O43353 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
RIPK2O43353 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.73■□□□□ 0.91
RIPK2O43353 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIPK2O43353 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIPK2O43353 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms