Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC053503.5-201ENST00000601508 636 ntBASIC24.52■■□□□ 1.52
FOXN1O15353 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC24.52■■□□□ 1.52
FOXN1O15353 AC005363.2-201ENST00000618631 242 ntBASIC24.52■■□□□ 1.52
FOXN1O15353 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.52■■□□□ 1.52
FOXN1O15353 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
FOXN1O15353 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.52■■□□□ 1.52
FOXN1O15353 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
FOXN1O15353 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.51■■□□□ 1.51
FOXN1O15353 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
FOXN1O15353 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
FOXN1O15353 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
FOXN1O15353 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
FOXN1O15353 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.51■■□□□ 1.51
FOXN1O15353 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.51■■□□□ 1.51
FOXN1O15353 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
FOXN1O15353 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24.51■■□□□ 1.51
FOXN1O15353 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
FOXN1O15353 NTF6B-201ENST00000591913 560 ntBASIC24.51■■□□□ 1.51
FOXN1O15353 RBM17P2-201ENST00000616397 1405 ntBASIC24.51■■□□□ 1.51
FOXN1O15353 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
FOXN1O15353 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
FOXN1O15353 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
FOXN1O15353 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
FOXN1O15353 MMP23A-201ENST00000234610 1017 ntBASIC24.5■■□□□ 1.51
FOXN1O15353 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
FOXN1O15353 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
FOXN1O15353 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC24.5■■□□□ 1.51
FOXN1O15353 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
FOXN1O15353 AC124016.1-201ENST00000609552 612 ntBASIC24.5■■□□□ 1.51
FOXN1O15353 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.5■■□□□ 1.51
FOXN1O15353 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
FOXN1O15353 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
FOXN1O15353 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
FOXN1O15353 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
FOXN1O15353 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.5■■□□□ 1.51
FOXN1O15353 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
FOXN1O15353 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.49■■□□□ 1.51
FOXN1O15353 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
FOXN1O15353 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
FOXN1O15353 LY6E-205ENST00000519611 635 ntTSL 3 BASIC24.49■■□□□ 1.51
FOXN1O15353 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
FOXN1O15353 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC24.49■■□□□ 1.51
FOXN1O15353 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC24.49■■□□□ 1.51
FOXN1O15353 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
FOXN1O15353 AL137060.1-201ENST00000618151 2648 ntBASIC24.49■■□□□ 1.51
FOXN1O15353 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
FOXN1O15353 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
FOXN1O15353 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
FOXN1O15353 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.49■■□□□ 1.51
FOXN1O15353 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
FOXN1O15353 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
FOXN1O15353 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.49■■□□□ 1.51
FOXN1O15353 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
FOXN1O15353 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.49■■□□□ 1.51
FOXN1O15353 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
FOXN1O15353 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
FOXN1O15353 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
FOXN1O15353 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
FOXN1O15353 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
FOXN1O15353 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
FOXN1O15353 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
FOXN1O15353 SERF2-207ENST00000409614 582 ntTSL 2 BASIC24.48■■□□□ 1.51
FOXN1O15353 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
FOXN1O15353 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.48■■□□□ 1.51
FOXN1O15353 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC24.48■■□□□ 1.51
FOXN1O15353 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.48■■□□□ 1.51
FOXN1O15353 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.48■■□□□ 1.51
FOXN1O15353 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC24.48■■□□□ 1.51
FOXN1O15353 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
FOXN1O15353 MIR6786-201ENST00000616843 113 ntBASIC24.48■■□□□ 1.51
FOXN1O15353 AC120498.10-201ENST00000621827 505 ntBASIC24.48■■□□□ 1.51
FOXN1O15353 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.48■■□□□ 1.51
FOXN1O15353 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
FOXN1O15353 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.47■■□□□ 1.51
FOXN1O15353 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FOXN1O15353 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.47■■□□□ 1.51
FOXN1O15353 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.47■■□□□ 1.51
FOXN1O15353 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.47■■□□□ 1.51
FOXN1O15353 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FOXN1O15353 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FOXN1O15353 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FOXN1O15353 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.47■■□□□ 1.51
FOXN1O15353 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
FOXN1O15353 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.47■■□□□ 1.51
FOXN1O15353 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
FOXN1O15353 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.47■■□□□ 1.51
FOXN1O15353 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
FOXN1O15353 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.47■■□□□ 1.51
FOXN1O15353 AC010542.4-201ENST00000563151 1910 ntBASIC24.47■■□□□ 1.51
FOXN1O15353 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FOXN1O15353 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FOXN1O15353 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
FOXN1O15353 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
FOXN1O15353 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
FOXN1O15353 KRT18P57-201ENST00000443599 1254 ntBASIC24.46■■□□□ 1.51
FOXN1O15353 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC24.46■■□□□ 1.51
FOXN1O15353 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC24.46■■□□□ 1.51
FOXN1O15353 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.46■■□□□ 1.51
FOXN1O15353 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
FOXN1O15353 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms