Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 AC105020.6-201ENST00000621523 1217 ntBASIC21.95■■□□□ 1.1
SPTLC1O15269 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SPTLC1O15269 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SPTLC1O15269 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SPTLC1O15269 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.95■■□□□ 1.1
SPTLC1O15269 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SPTLC1O15269 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
SPTLC1O15269 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPTLC1O15269 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPTLC1O15269 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.94■■□□□ 1.1
SPTLC1O15269 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SPTLC1O15269 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SPTLC1O15269 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.94■■□□□ 1.1
SPTLC1O15269 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SPTLC1O15269 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SPTLC1O15269 AC121338.2-201ENST00000622535 1744 ntBASIC21.94■■□□□ 1.1
SPTLC1O15269 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPTLC1O15269 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.94■■□□□ 1.1
SPTLC1O15269 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SPTLC1O15269 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPTLC1O15269 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.94■■□□□ 1.1
SPTLC1O15269 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPTLC1O15269 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPTLC1O15269 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPTLC1O15269 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPTLC1O15269 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SPTLC1O15269 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPTLC1O15269 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.93■■□□□ 1.1
SPTLC1O15269 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.93■■□□□ 1.1
SPTLC1O15269 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.93■■□□□ 1.1
SPTLC1O15269 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SPTLC1O15269 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.92■■□□□ 1.1
SPTLC1O15269 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC1O15269 PLK5-205ENST00000642079 1969 ntBASIC21.92■■□□□ 1.1
SPTLC1O15269 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC1O15269 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC1O15269 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC1O15269 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC1O15269 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC1O15269 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC1O15269 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC1O15269 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.92■■□□□ 1.1
SPTLC1O15269 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.92■■□□□ 1.1
SPTLC1O15269 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.92■■□□□ 1.1
SPTLC1O15269 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.92■■□□□ 1.1
SPTLC1O15269 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC1O15269 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SPTLC1O15269 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC1O15269 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC1O15269 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.92■■□□□ 1.1
SPTLC1O15269 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SPTLC1O15269 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 AC005229.4-201ENST00000610085 2198 ntBASIC21.91■■□□□ 1.1
SPTLC1O15269 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.91■■□□□ 1.1
SPTLC1O15269 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.91■■□□□ 1.1
SPTLC1O15269 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.91■■□□□ 1.1
SPTLC1O15269 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
SPTLC1O15269 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 AC027702.1-201ENST00000563810 1770 ntBASIC21.91■■□□□ 1.1
SPTLC1O15269 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC1O15269 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SPTLC1O15269 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.9■■□□□ 1.1
SPTLC1O15269 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC1O15269 AC007375.3-201ENST00000600936 2314 ntBASIC21.9■■□□□ 1.1
SPTLC1O15269 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.9■■□□□ 1.1
SPTLC1O15269 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.9■■□□□ 1.1
SPTLC1O15269 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC1O15269 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.9■■□□□ 1.1
SPTLC1O15269 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.9■■□□□ 1.1
SPTLC1O15269 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC1O15269 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SPTLC1O15269 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC1O15269 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC1O15269 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC1O15269 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC1O15269 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SPTLC1O15269 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SPTLC1O15269 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.9■■□□□ 1.1
SPTLC1O15269 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SPTLC1O15269 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC1O15269 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.89■■□□□ 1.1
SPTLC1O15269 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SPTLC1O15269 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SPTLC1O15269 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC1O15269 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC1O15269 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC1O15269 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.89■■□□□ 1.09
SPTLC1O15269 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.89■■□□□ 1.09
SPTLC1O15269 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.89■■□□□ 1.09
SPTLC1O15269 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms