Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNPHO15079 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.21■□□□□ 0.67
SNPHO15079 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNPHO15079 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.21■□□□□ 0.67
SNPHO15079 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SNPHO15079 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.2■□□□□ 0.66
SNPHO15079 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNPHO15079 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.2■□□□□ 0.66
SNPHO15079 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNPHO15079 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SNPHO15079 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNPHO15079 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.2■□□□□ 0.66
SNPHO15079 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SNPHO15079 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.2■□□□□ 0.66
SNPHO15079 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.2■□□□□ 0.66
SNPHO15079 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.2■□□□□ 0.66
SNPHO15079 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNPHO15079 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SNPHO15079 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNPHO15079 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SNPHO15079 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNPHO15079 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNPHO15079 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNPHO15079 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNPHO15079 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNPHO15079 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.19■□□□□ 0.66
SNPHO15079 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.19■□□□□ 0.66
SNPHO15079 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
SNPHO15079 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 AC120498.10-201ENST00000621827 505 ntBASIC19.19■□□□□ 0.66
SNPHO15079 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SNPHO15079 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.19■□□□□ 0.66
SNPHO15079 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SNPHO15079 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNPHO15079 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.18■□□□□ 0.66
SNPHO15079 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.18■□□□□ 0.66
SNPHO15079 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.18■□□□□ 0.66
SNPHO15079 SLC7A5P2-201ENST00000553010 536 ntBASIC19.18■□□□□ 0.66
SNPHO15079 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.18■□□□□ 0.66
SNPHO15079 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 MFSD11-216ENST00000590393 1141 ntBASIC19.18■□□□□ 0.66
SNPHO15079 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 AC011767.1-201ENST00000617410 1153 ntBASIC19.18■□□□□ 0.66
SNPHO15079 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.18■□□□□ 0.66
SNPHO15079 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNPHO15079 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SNPHO15079 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SNPHO15079 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNPHO15079 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNPHO15079 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNPHO15079 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SNPHO15079 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNPHO15079 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SNPHO15079 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNPHO15079 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNPHO15079 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.17■□□□□ 0.66
SNPHO15079 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNPHO15079 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNPHO15079 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.17■□□□□ 0.66
SNPHO15079 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.17■□□□□ 0.66
SNPHO15079 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.17■□□□□ 0.66
SNPHO15079 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SNPHO15079 SLC7A5P1-201ENST00000568957 537 ntBASIC19.17■□□□□ 0.66
SNPHO15079 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.17■□□□□ 0.66
SNPHO15079 AC080038.1-201ENST00000611274 1154 ntBASIC19.17■□□□□ 0.66
SNPHO15079 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNPHO15079 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNPHO15079 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.17■□□□□ 0.66
SNPHO15079 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNPHO15079 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNPHO15079 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.17■□□□□ 0.66
SNPHO15079 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SNPHO15079 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.16■□□□□ 0.66
SNPHO15079 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNPHO15079 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms