Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDX4O14627 FAM197Y1-201ENST00000421178 764 ntBASIC19.92■□□□□ 0.78
CDX4O14627 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.92■□□□□ 0.78
CDX4O14627 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDX4O14627 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDX4O14627 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.92■□□□□ 0.78
CDX4O14627 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDX4O14627 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDX4O14627 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDX4O14627 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDX4O14627 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDX4O14627 KRT8P9-201ENST00000558927 1449 ntBASIC19.92■□□□□ 0.78
CDX4O14627 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX4O14627 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX4O14627 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDX4O14627 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CDX4O14627 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDX4O14627 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.91■□□□□ 0.78
CDX4O14627 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDX4O14627 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.91■□□□□ 0.78
CDX4O14627 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.91■□□□□ 0.78
CDX4O14627 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX4O14627 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX4O14627 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.91■□□□□ 0.78
CDX4O14627 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX4O14627 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX4O14627 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDX4O14627 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDX4O14627 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDX4O14627 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDX4O14627 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.9■□□□□ 0.78
CDX4O14627 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDX4O14627 PGM5P4-201ENST00000421970 445 ntBASIC19.9■□□□□ 0.78
CDX4O14627 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.9■□□□□ 0.78
CDX4O14627 KRT16P5-201ENST00000455284 522 ntBASIC19.9■□□□□ 0.78
CDX4O14627 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDX4O14627 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDX4O14627 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.9■□□□□ 0.78
CDX4O14627 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDX4O14627 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.9■□□□□ 0.78
CDX4O14627 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.89■□□□□ 0.77
CDX4O14627 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDX4O14627 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDX4O14627 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDX4O14627 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDX4O14627 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDX4O14627 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDX4O14627 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDX4O14627 AL353807.1-201ENST00000427475 662 ntBASIC19.89■□□□□ 0.77
CDX4O14627 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.89■□□□□ 0.77
CDX4O14627 RBM17P1-201ENST00000453646 1190 ntBASIC19.89■□□□□ 0.77
CDX4O14627 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDX4O14627 AC079598.2-202ENST00000546624 1451 ntBASIC19.89■□□□□ 0.77
CDX4O14627 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDX4O14627 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.89■□□□□ 0.77
CDX4O14627 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.89■□□□□ 0.77
CDX4O14627 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDX4O14627 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDX4O14627 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDX4O14627 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.88■□□□□ 0.77
CDX4O14627 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDX4O14627 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.88■□□□□ 0.77
CDX4O14627 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.88■□□□□ 0.77
CDX4O14627 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDX4O14627 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.88■□□□□ 0.77
CDX4O14627 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.88■□□□□ 0.77
CDX4O14627 AL356652.1-201ENST00000615962 565 ntBASIC19.88■□□□□ 0.77
CDX4O14627 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.88■□□□□ 0.77
CDX4O14627 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.88■□□□□ 0.77
CDX4O14627 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.88■□□□□ 0.77
CDX4O14627 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDX4O14627 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CDX4O14627 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDX4O14627 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDX4O14627 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDX4O14627 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CDX4O14627 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDX4O14627 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CDX4O14627 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDX4O14627 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDX4O14627 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDX4O14627 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.87■□□□□ 0.77
CDX4O14627 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CDX4O14627 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDX4O14627 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDX4O14627 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDX4O14627 AC113347.1-201ENST00000413321 391 ntBASIC19.87■□□□□ 0.77
CDX4O14627 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.87■□□□□ 0.77
CDX4O14627 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
CDX4O14627 AL121829.2-201ENST00000620908 328 ntBASIC19.87■□□□□ 0.77
CDX4O14627 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.87■□□□□ 0.77
CDX4O14627 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.87■□□□□ 0.77
CDX4O14627 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDX4O14627 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.86■□□□□ 0.77
CDX4O14627 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.86■□□□□ 0.77
CDX4O14627 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.86■□□□□ 0.77
CDX4O14627 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.86■□□□□ 0.77
CDX4O14627 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.86■□□□□ 0.77
CDX4O14627 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.86■□□□□ 0.77
CDX4O14627 AC073195.1-201ENST00000607241 877 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms