Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 KRT8P36-201ENST00000489121 1440 ntBASIC20.03■□□□□ 0.8
EIF3FO00303 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
EIF3FO00303 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.03■□□□□ 0.8
EIF3FO00303 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
EIF3FO00303 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3FO00303 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3FO00303 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3FO00303 MIR935-201ENST00000401179 91 ntBASIC20.03■□□□□ 0.8
EIF3FO00303 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.03■□□□□ 0.8
EIF3FO00303 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.03■□□□□ 0.8
EIF3FO00303 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.03■□□□□ 0.8
EIF3FO00303 AC020907.5-201ENST00000624372 1936 ntBASIC20.03■□□□□ 0.8
EIF3FO00303 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3FO00303 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
EIF3FO00303 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.03■□□□□ 0.8
EIF3FO00303 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3FO00303 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
EIF3FO00303 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EIF3FO00303 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.02■□□□□ 0.8
EIF3FO00303 AC068338.2-201ENST00000563278 1430 ntBASIC20.02■□□□□ 0.8
EIF3FO00303 AC087633.2-202ENST00000565166 1439 ntBASIC20.02■□□□□ 0.8
EIF3FO00303 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
EIF3FO00303 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3FO00303 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
EIF3FO00303 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3FO00303 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.02■□□□□ 0.8
EIF3FO00303 RARRES2P4-201ENST00000514074 484 ntBASIC20.02■□□□□ 0.8
EIF3FO00303 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.02■□□□□ 0.8
EIF3FO00303 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.02■□□□□ 0.8
EIF3FO00303 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.02■□□□□ 0.8
EIF3FO00303 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
EIF3FO00303 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.02■□□□□ 0.8
EIF3FO00303 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.02■□□□□ 0.8
EIF3FO00303 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.02■□□□□ 0.8
EIF3FO00303 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.02■□□□□ 0.8
EIF3FO00303 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
EIF3FO00303 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
EIF3FO00303 AC073314.1-201ENST00000568729 2216 ntBASIC20.02■□□□□ 0.79
EIF3FO00303 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.02■□□□□ 0.79
EIF3FO00303 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EIF3FO00303 AC092667.1-201ENST00000434301 2586 ntBASIC20.01■□□□□ 0.79
EIF3FO00303 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
EIF3FO00303 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EIF3FO00303 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.01■□□□□ 0.79
EIF3FO00303 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
EIF3FO00303 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
EIF3FO00303 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
EIF3FO00303 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
EIF3FO00303 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EIF3FO00303 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
EIF3FO00303 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.01■□□□□ 0.79
EIF3FO00303 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.01■□□□□ 0.79
EIF3FO00303 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.01■□□□□ 0.79
EIF3FO00303 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EIF3FO00303 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3FO00303 AC092720.2-201ENST00000602388 1665 ntBASIC20■□□□□ 0.79
EIF3FO00303 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3FO00303 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20■□□□□ 0.79
EIF3FO00303 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
EIF3FO00303 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20■□□□□ 0.79
EIF3FO00303 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20■□□□□ 0.79
EIF3FO00303 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EIF3FO00303 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20■□□□□ 0.79
EIF3FO00303 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20■□□□□ 0.79
EIF3FO00303 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
EIF3FO00303 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20■□□□□ 0.79
EIF3FO00303 AC016405.3-201ENST00000607710 860 ntBASIC20■□□□□ 0.79
EIF3FO00303 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3FO00303 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3FO00303 CYP21A1P-202ENST00000354927 1481 ntBASIC19.99■□□□□ 0.79
EIF3FO00303 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3FO00303 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
EIF3FO00303 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.99■□□□□ 0.79
EIF3FO00303 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3FO00303 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
EIF3FO00303 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3FO00303 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3FO00303 AC007322.1-201ENST00000426983 750 ntBASIC19.99■□□□□ 0.79
EIF3FO00303 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.99■□□□□ 0.79
EIF3FO00303 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3FO00303 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3FO00303 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
EIF3FO00303 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.99■□□□□ 0.79
EIF3FO00303 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3FO00303 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3FO00303 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3FO00303 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
EIF3FO00303 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms