Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AP3B1O00203 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
AP3B1O00203 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.67■□□□□ 0.9
AP3B1O00203 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP3B1O00203 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP3B1O00203 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.66■□□□□ 0.9
AP3B1O00203 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.66■□□□□ 0.9
AP3B1O00203 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
AP3B1O00203 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.66■□□□□ 0.9
AP3B1O00203 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.66■□□□□ 0.9
AP3B1O00203 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.66■□□□□ 0.9
AP3B1O00203 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
AP3B1O00203 MYCNOS-205ENST00000641950 531 ntBASIC20.66■□□□□ 0.9
AP3B1O00203 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
AP3B1O00203 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.66■□□□□ 0.9
AP3B1O00203 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
AP3B1O00203 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.66■□□□□ 0.9
AP3B1O00203 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
AP3B1O00203 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
AP3B1O00203 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.66■□□□□ 0.9
AP3B1O00203 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
AP3B1O00203 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3B1O00203 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3B1O00203 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3B1O00203 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.65■□□□□ 0.9
AP3B1O00203 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
AP3B1O00203 AL162377.1-201ENST00000618844 1793 ntBASIC20.65■□□□□ 0.9
AP3B1O00203 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
AP3B1O00203 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3B1O00203 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP3B1O00203 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3B1O00203 PGM5P4-201ENST00000421970 445 ntBASIC20.65■□□□□ 0.9
AP3B1O00203 KRT18P11-201ENST00000435214 1283 ntBASIC20.65■□□□□ 0.9
AP3B1O00203 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3B1O00203 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.65■□□□□ 0.9
AP3B1O00203 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP3B1O00203 UBE2DNL-204ENST00000602536 740 ntBASIC20.65■□□□□ 0.9
AP3B1O00203 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3B1O00203 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
AP3B1O00203 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.65■□□□□ 0.9
AP3B1O00203 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP3B1O00203 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
AP3B1O00203 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP3B1O00203 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.64■□□□□ 0.9
AP3B1O00203 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP3B1O00203 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP3B1O00203 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP3B1O00203 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
AP3B1O00203 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.64■□□□□ 0.9
AP3B1O00203 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP3B1O00203 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3B1O00203 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.64■□□□□ 0.89
AP3B1O00203 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3B1O00203 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3B1O00203 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.64■□□□□ 0.89
AP3B1O00203 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.64■□□□□ 0.89
AP3B1O00203 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP3B1O00203 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.64■□□□□ 0.89
AP3B1O00203 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
AP3B1O00203 NTF6G-201ENST00000591094 616 ntBASIC20.64■□□□□ 0.89
AP3B1O00203 MIR6821-201ENST00000617625 74 ntBASIC20.64■□□□□ 0.89
AP3B1O00203 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
AP3B1O00203 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3B1O00203 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3B1O00203 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.64■□□□□ 0.89
AP3B1O00203 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
AP3B1O00203 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.64■□□□□ 0.89
AP3B1O00203 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP3B1O00203 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP3B1O00203 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
AP3B1O00203 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3B1O00203 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.63■□□□□ 0.89
AP3B1O00203 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3B1O00203 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3B1O00203 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3B1O00203 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.63■□□□□ 0.89
AP3B1O00203 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.63■□□□□ 0.89
AP3B1O00203 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.63■□□□□ 0.89
AP3B1O00203 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
AP3B1O00203 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
AP3B1O00203 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
AP3B1O00203 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.63■□□□□ 0.89
AP3B1O00203 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
AP3B1O00203 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP3B1O00203 AL121603.2-201ENST00000557373 2117 ntBASIC20.63■□□□□ 0.89
AP3B1O00203 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms