Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 AC016769.1-201ENST00000409132 1010 ntBASIC18.16■□□□□ 0.5
NPIPB4C9JG80 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 AC100791.3-201ENST00000617619 330 ntBASIC18.16■□□□□ 0.5
NPIPB4C9JG80 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NPIPB4C9JG80 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NPIPB4C9JG80 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.14■□□□□ 0.5
NPIPB4C9JG80 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.14■□□□□ 0.49
NPIPB4C9JG80 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NPIPB4C9JG80 AC073130.3-201ENST00000624389 2278 ntBASIC18.14■□□□□ 0.49
NPIPB4C9JG80 CYP21A1P-202ENST00000354927 1481 ntBASIC18.14■□□□□ 0.49
NPIPB4C9JG80 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 AL512408.1-201ENST00000569378 2000 ntBASIC18.13■□□□□ 0.49
NPIPB4C9JG80 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 CNN2P6-201ENST00000439038 900 ntBASIC18.13■□□□□ 0.49
NPIPB4C9JG80 AL162430.1-201ENST00000480705 870 ntBASIC18.13■□□□□ 0.49
NPIPB4C9JG80 DUX4L16-201ENST00000555130 1264 ntBASIC18.13■□□□□ 0.49
NPIPB4C9JG80 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
NPIPB4C9JG80 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 AL356652.1-201ENST00000615962 565 ntBASIC18.12■□□□□ 0.49
NPIPB4C9JG80 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPB4C9JG80 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms