Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.66■□□□□ 0.26
LINC00473A8K010 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.66■□□□□ 0.26
LINC00473A8K010 CCDC92B-201ENST00000575506 885 ntBASIC16.66■□□□□ 0.26
LINC00473A8K010 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.66■□□□□ 0.26
LINC00473A8K010 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LINC00473A8K010 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LINC00473A8K010 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00473A8K010 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00473A8K010 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00473A8K010 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00473A8K010 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC00473A8K010 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LINC00473A8K010 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.65■□□□□ 0.26
LINC00473A8K010 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC00473A8K010 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
LINC00473A8K010 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC00473A8K010 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC00473A8K010 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.65■□□□□ 0.26
LINC00473A8K010 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.65■□□□□ 0.26
LINC00473A8K010 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.65■□□□□ 0.26
LINC00473A8K010 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.65■□□□□ 0.26
LINC00473A8K010 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC00473A8K010 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LINC00473A8K010 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC00473A8K010 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LINC00473A8K010 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LINC00473A8K010 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LINC00473A8K010 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.65■□□□□ 0.26
LINC00473A8K010 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00473A8K010 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
LINC00473A8K010 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 AC004854.2-201ENST00000608450 1441 ntBASIC16.64■□□□□ 0.25
LINC00473A8K010 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LINC00473A8K010 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LINC00473A8K010 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 KRT18P14-201ENST00000534205 1250 ntBASIC16.64■□□□□ 0.25
LINC00473A8K010 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC00473A8K010 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC00473A8K010 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC00473A8K010 MIR2861-201ENST00000636310 90 ntBASIC16.64■□□□□ 0.25
LINC00473A8K010 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC00473A8K010 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC00473A8K010 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC00473A8K010 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LINC00473A8K010 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00473A8K010 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LINC00473A8K010 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LINC00473A8K010 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00473A8K010 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00473A8K010 KRT18P20-201ENST00000548986 1279 ntBASIC16.63■□□□□ 0.25
LINC00473A8K010 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.63■□□□□ 0.25
LINC00473A8K010 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.63■□□□□ 0.25
LINC00473A8K010 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC00473A8K010 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00473A8K010 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LINC00473A8K010 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC00473A8K010 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC00473A8K010 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00473A8K010 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00473A8K010 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00473A8K010 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC00473A8K010 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LINC00473A8K010 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC00473A8K010 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00473A8K010 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00473A8K010 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms