Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.54□□□□□ -0.08
LINC01549A6NIU2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 AC092720.2-201ENST00000602388 1665 ntBASIC14.53□□□□□ -0.08
LINC01549A6NIU2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 AC010980.1-201ENST00000587192 1142 ntBASIC14.53□□□□□ -0.08
LINC01549A6NIU2 AL117332.1-201ENST00000622628 974 ntBASIC14.53□□□□□ -0.08
LINC01549A6NIU2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.53□□□□□ -0.08
LINC01549A6NIU2 TCF3P1-201ENST00000423021 1937 ntBASIC14.53□□□□□ -0.08
LINC01549A6NIU2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
LINC01549A6NIU2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01549A6NIU2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
LINC01549A6NIU2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LINC01549A6NIU2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC01549A6NIU2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01549A6NIU2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01549A6NIU2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01549A6NIU2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01549A6NIU2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01549A6NIU2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 AC011484.1-201ENST00000377652 1995 ntBASIC14.51□□□□□ -0.09
LINC01549A6NIU2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 pRNA.6-201ENST00000610482 90 ntBASIC14.51□□□□□ -0.09
LINC01549A6NIU2 pRNA.5-201ENST00000612139 90 ntBASIC14.51□□□□□ -0.09
LINC01549A6NIU2 pRNA.11-201ENST00000618423 90 ntBASIC14.51□□□□□ -0.09
LINC01549A6NIU2 pRNA.13-201ENST00000619112 90 ntBASIC14.51□□□□□ -0.09
LINC01549A6NIU2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 LETM1P2-201ENST00000597330 2178 ntBASIC14.51□□□□□ -0.09
LINC01549A6NIU2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01549A6NIU2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 ATP5G2P3-201ENST00000429083 425 ntBASIC14.5□□□□□ -0.09
LINC01549A6NIU2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 AC092028.1-203ENST00000608262 953 ntBASIC14.5□□□□□ -0.09
LINC01549A6NIU2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01549A6NIU2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms