Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RCCD1A6NED2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RCCD1A6NED2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.78■■□□□ 1.08
RCCD1A6NED2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.78■■□□□ 1.08
RCCD1A6NED2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.78■■□□□ 1.08
RCCD1A6NED2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.78■■□□□ 1.08
RCCD1A6NED2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.78■■□□□ 1.08
RCCD1A6NED2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.78■■□□□ 1.08
RCCD1A6NED2 MIR2861-201ENST00000636310 90 ntBASIC21.78■■□□□ 1.08
RCCD1A6NED2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RCCD1A6NED2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RCCD1A6NED2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RCCD1A6NED2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.78■■□□□ 1.08
RCCD1A6NED2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.78■■□□□ 1.08
RCCD1A6NED2 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.78■■□□□ 1.08
RCCD1A6NED2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RCCD1A6NED2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RCCD1A6NED2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RCCD1A6NED2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.77■■□□□ 1.08
RCCD1A6NED2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RCCD1A6NED2 AC008175.2-201ENST00000612840 297 ntBASIC21.77■■□□□ 1.08
RCCD1A6NED2 MIR6084-201ENST00000622012 110 ntBASIC21.77■■□□□ 1.08
RCCD1A6NED2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.77■■□□□ 1.08
RCCD1A6NED2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RCCD1A6NED2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
RCCD1A6NED2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.77■■□□□ 1.07
RCCD1A6NED2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.07
RCCD1A6NED2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RCCD1A6NED2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RCCD1A6NED2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RCCD1A6NED2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RCCD1A6NED2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
RCCD1A6NED2 AC008406.3-201ENST00000620001 1374 ntBASIC21.76■■□□□ 1.07
RCCD1A6NED2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RCCD1A6NED2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RCCD1A6NED2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RCCD1A6NED2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.76■■□□□ 1.07
RCCD1A6NED2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.76■■□□□ 1.07
RCCD1A6NED2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.76■■□□□ 1.07
RCCD1A6NED2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RCCD1A6NED2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.76■■□□□ 1.07
RCCD1A6NED2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RCCD1A6NED2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RCCD1A6NED2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RCCD1A6NED2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RCCD1A6NED2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RCCD1A6NED2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RCCD1A6NED2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RCCD1A6NED2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.75■■□□□ 1.07
RCCD1A6NED2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RCCD1A6NED2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RCCD1A6NED2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RCCD1A6NED2 KRT87P-202ENST00000534226 1464 ntBASIC21.75■■□□□ 1.07
RCCD1A6NED2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RCCD1A6NED2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
RCCD1A6NED2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RCCD1A6NED2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RCCD1A6NED2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 SUDS3P1-201ENST00000505831 966 ntBASIC21.74■■□□□ 1.07
RCCD1A6NED2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 AC138907.5-202ENST00000569484 235 ntBASIC21.74■■□□□ 1.07
RCCD1A6NED2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 AL354811.1-201ENST00000610286 706 ntBASIC21.74■■□□□ 1.07
RCCD1A6NED2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RCCD1A6NED2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RCCD1A6NED2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms