Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 AC116562.2-201ENST00000507042 360 ntBASIC19.73■□□□□ 0.75
CNOT1A5YKK6 FITM1-202ENST00000559294 800 ntBASIC19.73■□□□□ 0.75
CNOT1A5YKK6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 AC027702.1-201ENST00000563810 1770 ntBASIC19.73■□□□□ 0.75
CNOT1A5YKK6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNOT1A5YKK6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 UNC93B2-201ENST00000285383 730 ntBASIC19.72■□□□□ 0.75
CNOT1A5YKK6 AC104076.2-201ENST00000448912 469 ntBASIC19.72■□□□□ 0.75
CNOT1A5YKK6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 HTR7P1-201ENST00000538670 1336 ntBASIC19.72■□□□□ 0.75
CNOT1A5YKK6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 AL137013.1-201ENST00000432946 1228 ntBASIC19.72■□□□□ 0.75
CNOT1A5YKK6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CNOT1A5YKK6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.71■□□□□ 0.75
CNOT1A5YKK6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT1A5YKK6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT1A5YKK6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT1A5YKK6 AC124283.5-201ENST00000624661 1809 ntBASIC19.71■□□□□ 0.75
CNOT1A5YKK6 AC092053.2-201ENST00000640557 1818 ntBASIC19.71■□□□□ 0.75
CNOT1A5YKK6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT1A5YKK6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT1A5YKK6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT1A5YKK6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CNOT1A5YKK6 KRT16P5-201ENST00000455284 522 ntBASIC19.71■□□□□ 0.75
CNOT1A5YKK6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNOT1A5YKK6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.71■□□□□ 0.75
CNOT1A5YKK6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CNOT1A5YKK6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 KRT18P48-201ENST00000434763 852 ntBASIC19.69■□□□□ 0.74
CNOT1A5YKK6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNOT1A5YKK6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms