Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV3S1A0A5B6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 TMEM179-206ENST00000616017 1645 ntBASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 MIR3621-201ENST00000580529 85 ntBASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.16■□□□□ 0.66
TCRBV3S1A0A5B6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 AC009299.2-201ENST00000482477 511 ntBASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 AC133561.4-201ENST00000566112 224 ntBASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 AC093484.2-201ENST00000580996 2166 ntBASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV3S1A0A5B6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TCRBV3S1A0A5B6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
TCRBV3S1A0A5B6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
TCRBV3S1A0A5B6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV3S1A0A5B6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 KRT16P3-201ENST00000439127 1283 ntBASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 AC011298.3-201ENST00000615796 283 ntBASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 AP004607.4-201ENST00000530158 1459 ntBASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV3S1A0A5B6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms