Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-4A0A1B0GX49 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-4A0A1B0GX49 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV6-4A0A1B0GX49 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 PGM5P4-201ENST00000421970 445 ntBASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 KRT18P61-201ENST00000585825 1298 ntBASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 AC092667.1-201ENST00000434301 2586 ntBASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV6-4A0A1B0GX49 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms