Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
RNF103-CHMP3A0A140T963 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF103-CHMP3A0A140T963 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF103-CHMP3A0A140T963 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 AC087289.5-201ENST00000586076 3175 ntBASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF103-CHMP3A0A140T963 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 TPRG1LP1-201ENST00000598702 760 ntBASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
RNF103-CHMP3A0A140T963 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 MIR6084-201ENST00000622012 110 ntBASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 AL358852.1-201ENST00000623174 1268 ntBASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF103-CHMP3A0A140T963 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 EEF1DP3-203ENST00000566025 782 ntBASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF103-CHMP3A0A140T963 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms