Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AL158211.5-201ENST00000623583 2518 ntBASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AC005332.7-201ENST00000614046 2005 ntBASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AC233992.3-201ENST00000607491 485 ntBASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 RARRES2P11-201ENST00000635158 484 ntBASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV6-1A0A0K0K1D8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AC008175.2-201ENST00000612840 297 ntBASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.27■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.27■□□□□ 0.03
TRBV6-1A0A0K0K1D8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV6-1A0A0K0K1D8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-1A0A0K0K1D8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-1A0A0K0K1D8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-1A0A0K0K1D8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-1A0A0K0K1D8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV6-1A0A0K0K1D8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV6-1A0A0K0K1D8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-1A0A0K0K1D8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV6-1A0A0K0K1D8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV6-1A0A0K0K1D8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRBV6-1A0A0K0K1D8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms