Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 KRT87P-202ENST00000534226 1464 ntBASIC18.77■□□□□ 0.59
TRBV4-1A0A0J9YWV2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.77■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AC079140.4-201ENST00000507448 529 ntBASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 MIR6084-201ENST00000622012 110 ntBASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRBV4-1A0A0J9YWV2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 KRT16P2-201ENST00000414673 1423 ntBASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AC245052.3-201ENST00000450182 901 ntBASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV4-1A0A0J9YWV2 SMG8-203ENST00000578922 2178 ntBASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 SUDS3P1-201ENST00000505831 966 ntBASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 AC138907.5-202ENST00000569484 235 ntBASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV4-1A0A0J9YWV2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV4-1A0A0J9YWV2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms