Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.37□□□□□ -0.11
TRAV12-1A0A0B4J245 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-1A0A0B4J245 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-1A0A0B4J245 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.37□□□□□ -0.11
TRAV12-1A0A0B4J245 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV12-1A0A0B4J245 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-1A0A0B4J245 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-1A0A0B4J245 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV12-1A0A0B4J245 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TRAV12-1A0A0B4J245 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-1A0A0B4J245 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.37□□□□□ -0.11
TRAV12-1A0A0B4J245 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 AP006587.3-201ENST00000525742 1516 ntBASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 AL451085.2-201ENST00000605085 799 ntBASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 AC137630.3-201ENST00000607245 391 ntBASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV12-1A0A0B4J245 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 BHLHE23-202ENST00000612929 1109 ntBASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV12-1A0A0B4J245 AC093503.3-201ENST00000624917 2352 ntBASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 U85056.1-201ENST00000616429 682 ntBASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 AC005082.1-201ENST00000413042 2259 ntBASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-1A0A0B4J245 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms