Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC9.33□□□□□ -0.92
SLC1A1P43005 GSG1-204ENST00000432710 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 LINC00112-201ENST00000432830 522 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 MTAPP2-201ENST00000437063 832 ntBASIC9.33□□□□□ -0.92
SLC1A1P43005 RN7SL159P-201ENST00000485164 292 ntBASIC9.33□□□□□ -0.92
SLC1A1P43005 AC026787.1-201ENST00000504182 420 ntTSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 LINC02116-201ENST00000509455 493 ntTSL 2 BASIC9.33□□□□□ -0.92
SLC1A1P43005 AC006499.7-201ENST00000512421 1117 ntBASIC9.33□□□□□ -0.92
SLC1A1P43005 AC017091.1-201ENST00000513551 1061 ntTSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 AC091946.1-201ENST00000522350 852 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 AC011632.1-203ENST00000522914 454 ntTSL 3 BASIC9.33□□□□□ -0.92
SLC1A1P43005 AP000879.1-201ENST00000526174 976 ntTSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 ZNF252P-203ENST00000527222 876 ntTSL 2 BASIC9.33□□□□□ -0.92
SLC1A1P43005 AP003064.2-201ENST00000528983 510 ntTSL 3 BASIC9.33□□□□□ -0.92
SLC1A1P43005 LINC01579-201ENST00000553818 561 ntTSL 4 BASIC9.33□□□□□ -0.92
SLC1A1P43005 AC005225.3-201ENST00000555972 519 ntTSL 2 BASIC9.33□□□□□ -0.92
SLC1A1P43005 FLVCR2-213ENST00000556856 1020 ntTSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 GMFG-204ENST00000595636 487 ntTSL 2 BASIC9.33□□□□□ -0.92
SLC1A1P43005 AC004853.2-201ENST00000609561 916 ntBASIC9.33□□□□□ -0.92
SLC1A1P43005 PGM5P3-AS1-206ENST00000621255 877 ntTSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 CU633904.1-204ENST00000624907 777 ntTSL 3 BASIC9.33□□□□□ -0.92
SLC1A1P43005 AC097493.5-201ENST00000641103 1010 ntBASIC9.33□□□□□ -0.92
SLC1A1P43005 LINC01132-202ENST00000641214 1085 ntBASIC9.33□□□□□ -0.92
SLC1A1P43005 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
SLC1A1P43005 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC9.33□□□□□ -0.92
SLC1A1P43005 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC9.33□□□□□ -0.92
SLC1A1P43005 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.33□□□□□ -0.92
SLC1A1P43005 FRG2LP-201ENST00000586090 1563 ntBASIC9.33□□□□□ -0.92
SLC1A1P43005 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SLC1A1P43005 ZNF619-210ENST00000522736 2030 ntTSL 5 BASIC9.32□□□□□ -0.92
SLC1A1P43005 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC9.32□□□□□ -0.92
SLC1A1P43005 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
SLC1A1P43005 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
SLC1A1P43005 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SLC1A1P43005 SLAMF7-203ENST00000368043 2689 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC9.32□□□□□ -0.92
SLC1A1P43005 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
SLC1A1P43005 CLCC1-206ENST00000369970 2078 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
SLC1A1P43005 CNFN-201ENST00000222032 523 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC9.32□□□□□ -0.92
SLC1A1P43005 CLEC2A-201ENST00000339766 732 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 RN7SKP10-201ENST00000364291 325 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 BZW2-203ENST00000407633 898 ntTSL 3 BASIC9.32□□□□□ -0.92
SLC1A1P43005 CALM2-202ENST00000409563 770 ntTSL 5 BASIC9.32□□□□□ -0.92
SLC1A1P43005 RPL13AP7-201ENST00000425147 611 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 PGAM1P6-201ENST00000425684 747 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 AP000532.1-201ENST00000440999 177 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 ATP6V1G1P3-201ENST00000442568 280 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 AC073626.2-201ENST00000449443 316 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC9.32□□□□□ -0.92
SLC1A1P43005 HNRNPA1P43-201ENST00000452680 910 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 AC112719.1-201ENST00000477971 315 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
SLC1A1P43005 AC044787.1-201ENST00000497325 792 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 EIF1AD-202ENST00000525767 743 ntTSL 5 BASIC9.32□□□□□ -0.92
SLC1A1P43005 AC069208.1-206ENST00000538905 832 ntTSL 4 BASIC9.32□□□□□ -0.92
SLC1A1P43005 AC026369.3-201ENST00000540226 586 ntTSL 2 BASIC9.32□□□□□ -0.92
SLC1A1P43005 GABRB3-205ENST00000545868 1267 ntTSL 5 BASIC9.32□□□□□ -0.92
SLC1A1P43005 MTCO1P2-201ENST00000554243 703 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 LINC01146-204ENST00000556033 833 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 AC100826.1-201ENST00000558010 890 ntTSL 2 BASIC9.32□□□□□ -0.92
SLC1A1P43005 MOK-239ENST00000561150 568 ntTSL 4 BASIC9.32□□□□□ -0.92
SLC1A1P43005 ARPP19-203ENST00000561971 799 ntTSL 3 BASIC9.32□□□□□ -0.92
SLC1A1P43005 KIR3DP1-201ENST00000580853 628 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 AC023855.1-201ENST00000585899 359 ntTSL 4 BASIC9.32□□□□□ -0.92
SLC1A1P43005 BRCA1-226ENST00000591534 1282 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 ZNF799-204ENST00000595766 576 ntTSL 4 BASIC9.32□□□□□ -0.92
SLC1A1P43005 CYP2B7P-204ENST00000599831 1272 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 ASNSD1-207ENST00000607535 579 ntTSL 3 BASIC9.32□□□□□ -0.92
SLC1A1P43005 MIR7847-201ENST00000610912 103 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 CEACAM5-209ENST00000616453 1160 ntTSL 5 BASIC9.32□□□□□ -0.92
SLC1A1P43005 PRSS3P3-202ENST00000618042 682 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 OR4Q2-202ENST00000622436 921 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
SLC1A1P43005 CR381653.1-205ENST00000623409 580 ntTSL 5 BASIC9.32□□□□□ -0.92
SLC1A1P43005 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC9.32□□□□□ -0.92
SLC1A1P43005 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC9.32□□□□□ -0.92
SLC1A1P43005 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 AC105233.5-202ENST00000642083 4132 ntBASIC9.32□□□□□ -0.92
SLC1A1P43005 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SLC1A1P43005 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
SLC1A1P43005 AC133561.2-202ENST00000561642 1301 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SLC1A1P43005 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SLC1A1P43005 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC9.31□□□□□ -0.92
SLC1A1P43005 PUS3-205ENST00000613398 1419 ntTSL 2 BASIC9.31□□□□□ -0.92
SLC1A1P43005 AC132825.4-201ENST00000582527 3644 ntBASIC9.31□□□□□ -0.92
SLC1A1P43005 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms