Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC020779.2-201ENST00000568984 393 ntTSL 3 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AC005838.2-201ENST00000584643 317 ntBASIC9.48□□□□□ -0.89
LMO3Q8TAP4 ZNF559-203ENST00000585352 967 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 OFCC1-217ENST00000611763 875 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AL354718.2-201ENST00000618030 371 ntTSL 2 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 SNX27-201ENST00000368838 1308 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 AL049840.1-201ENST00000498989 1404 ntTSL 4 BASIC9.48□□□□□ -0.89
LMO3Q8TAP4 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 GDNF-AS1-205ENST00000637926 3819 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AC092279.2-201ENST00000623742 2189 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 ANKRD20A5P-201ENST00000431648 3556 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 LINC01694-202ENST00000441095 6721 ntTSL 3 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AC136428.3-201ENST00000566387 1990 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 SPRR3-202ENST00000331860 985 ntAPPRIS P2 TSL 3 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AL591686.1-201ENST00000421878 766 ntTSL 2 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AKR1B1P1-201ENST00000429105 956 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AC093655.1-201ENST00000446187 641 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 LHFPL3-AS2-201ENST00000453666 923 ntTSL 3 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 IFNA22P-201ENST00000458710 570 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AC091152.1-201ENST00000472109 838 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AC112173.1-201ENST00000505876 327 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 LINC01095-203ENST00000512063 1175 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 SDHD-203ENST00000526592 861 ntTSL 3 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AC025423.3-201ENST00000541551 469 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 PCED1B-AS1-205ENST00000548222 625 ntTSL 3 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 LINC02011-201ENST00000566553 3830 ntTSL 2 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AC011487.1-202ENST00000597004 551 ntTSL 4 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AL109930.1-201ENST00000606932 724 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 Metazoa_SRP.98-201ENST00000610878 274 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AL022345.3-201ENST00000611406 228 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 FAM238B-204ENST00000612040 423 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 PHBP6-201ENST00000614021 786 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 Metazoa_SRP.44-201ENST00000615037 294 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 PPARGC1A-218ENST00000617484 1026 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AD000813.1-201ENST00000624007 832 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 GRXCR2-202ENST00000639411 837 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 ZNF259P1-202ENST00000572422 4912 ntBASIC9.47□□□□□ -0.89
LMO3Q8TAP4 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 ZNF711-203ENST00000373165 4124 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 SATB1-204ENST00000417717 4589 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 AC136285.1-201ENST00000566092 1447 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
LMO3Q8TAP4 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 ANKRD20A11P-206ENST00000451663 3717 ntBASIC9.46□□□□□ -0.89
LMO3Q8TAP4 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 CDY15P-201ENST00000421995 1570 ntBASIC9.46□□□□□ -0.89
LMO3Q8TAP4 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 HSPA9P1-201ENST00000432228 2029 ntBASIC9.46□□□□□ -0.89
LMO3Q8TAP4 CDY22P-201ENST00000451423 1554 ntBASIC9.46□□□□□ -0.89
LMO3Q8TAP4 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 ELP3-202ENST00000380353 3078 ntTSL 2 BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
LMO3Q8TAP4 AC011453.1-201ENST00000597619 2239 ntBASIC9.46□□□□□ -0.89
LMO3Q8TAP4 ZNF610-209ENST00000616431 1772 ntAPPRIS P3 TSL 2 BASIC9.46□□□□□ -0.9
LMO3Q8TAP4 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LMO3Q8TAP4 AL137845.1-201ENST00000340681 1110 ntBASIC9.46□□□□□ -0.9
LMO3Q8TAP4 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC9.46□□□□□ -0.9
LMO3Q8TAP4 RNASE1-203ENST00000397970 769 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LMO3Q8TAP4 RN7SKP251-201ENST00000410830 314 ntBASIC9.46□□□□□ -0.9
LMO3Q8TAP4 HMGN1P34-201ENST00000413023 290 ntBASIC9.46□□□□□ -0.9
LMO3Q8TAP4 LINC00358-201ENST00000432697 1276 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LMO3Q8TAP4 AC016723.1-202ENST00000436982 643 ntTSL 5 BASIC9.46□□□□□ -0.9
LMO3Q8TAP4 ZEB1-AS1-203ENST00000441257 585 ntTSL 2 BASIC9.46□□□□□ -0.9
LMO3Q8TAP4 ASS1P11-201ENST00000441309 1216 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms