Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RFC4-207ENST00000433496 1111 ntTSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 BTG3P1-201ENST00000435859 716 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 AC016738.2-201ENST00000439150 493 ntTSL 3 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 AL031674.1-203ENST00000448013 538 ntTSL 3 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 RN7SL120P-201ENST00000463924 296 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 AC092958.1-202ENST00000485006 424 ntTSL 3 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 RN7SL38P-201ENST00000485238 296 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 USP32P2-204ENST00000508093 1174 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 AC105219.3-201ENST00000527579 374 ntTSL 2 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 TMEM107-209ENST00000533070 726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 AC025576.2-201ENST00000535806 390 ntTSL 3 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 AC055876.4-201ENST00000562515 712 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 AP001496.2-202ENST00000579933 977 ntTSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 MIR4253-201ENST00000581187 68 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 MIR4419A-201ENST00000583845 77 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 ZNF222-203ENST00000587846 537 ntTSL 4 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 AC005050.1-201ENST00000591803 550 ntTSL 4 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 TSPAN16-205ENST00000592955 927 ntTSL 3 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 AL591926.7-201ENST00000614301 211 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 ADAM6-202ENST00000616762 999 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 AP000457.1-201ENST00000620221 378 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 AP000769.3-201ENST00000622944 536 ntTSL 3 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 AL132780.5-201ENST00000623843 1625 ntBASIC8.31□□□□□ -1.08
SNX18Q96RF0 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 GTF2H2B-204ENST00000513202 1954 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.31□□□□□ -1.08
SNX18Q96RF0 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 CEACAM5-201ENST00000221992 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNX18Q96RF0 Z97200.1-201ENST00000606154 2045 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 USP30-203ENST00000392784 2483 ntTSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 CLNK-202ENST00000442825 1539 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 LINC00663-203ENST00000586885 2546 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 GNL3LP1-201ENST00000399458 1643 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 ZNF763-201ENST00000343949 2621 ntAPPRIS P2 TSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 CSHL1-202ENST00000309894 669 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 TRNT1-203ENST00000339437 976 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 GSTZ1-203ENST00000361389 1010 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 ADD3-AS1-201ENST00000369655 1147 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 LY6G6E-225ENST00000383418 383 ntAPPRIS P5 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 VAMP8-202ENST00000409760 805 ntTSL 3 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 FAM180A-202ENST00000415751 1073 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 PGAM1P6-201ENST00000425684 747 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 PTMAP4-201ENST00000426188 346 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 FAM133B-202ENST00000427372 931 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 AC141930.1-201ENST00000438247 786 ntTSL 4 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 WBP1LP6-201ENST00000438434 424 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 ADI1P1-201ENST00000438914 538 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 FGF14-AS1-201ENST00000444686 294 ntTSL 3 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 MTND4P30-201ENST00000450281 899 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 AL121748.2-201ENST00000451530 781 ntTSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 PPP1R8P1-201ENST00000452549 1044 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 ALDH7A1P2-201ENST00000456501 621 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 PTPRE-207ENST00000471218 522 ntTSL 3 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 LINC00881-202ENST00000471719 791 ntTSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 DMKN-237ENST00000472252 593 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 FXYD6P3-201ENST00000495569 285 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 LINC02221-201ENST00000508097 499 ntTSL 3 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 UBE2HP1-201ENST00000517466 360 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 RFPL4AP7-201ENST00000520120 215 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 AC090921.1-201ENST00000523703 1195 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 AP000424.1-202ENST00000523831 331 ntTSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 RAB6A-209ENST00000541973 1104 ntTSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 NINJ2-205ENST00000542920 670 ntTSL 2 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 MYL6-206ENST00000547408 683 ntTSL 3 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 MIR7515HG-229ENST00000589150 962 ntTSL 5 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 MRPS5P4-201ENST00000592830 325 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 AP000962.1-201ENST00000602654 729 ntTSL 5 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 AC024257.4-201ENST00000618746 458 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 MIR6744-201ENST00000619480 66 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 AL353649.1-201ENST00000625060 619 ntBASIC8.3□□□□□ -1.08
SNX18Q96RF0 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC8.3□□□□□ -1.08
SNX18Q96RF0 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNX18Q96RF0 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms