Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 PREPL-202ENST00000378511 2315 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 CHCHD5-202ENST00000409719 3272 ntTSL 2 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 RPL23AP7-202ENST00000416673 2078 ntTSL 2 BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 ATL1-202ENST00000441560 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 NTRK3-208ENST00000557856 2622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
NPIPA3F8WFD2 FIGNL1-211ENST00000611938 3543 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 NIPA2P4-201ENST00000523928 1341 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 LETM2-207ENST00000523983 1776 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 SLC10A5-201ENST00000518568 2568 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 RBM22-201ENST00000199814 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AL157714.2-203ENST00000438275 2400 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 ZNF10-203ENST00000426665 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 IL13-201ENST00000304506 1283 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 CSHL1-202ENST00000309894 669 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 KRTAP11-1-201ENST00000332378 912 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 TAGAP-202ENST00000338313 1183 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 BTG4-201ENST00000356018 1018 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 RN7SKP22-201ENST00000365097 293 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 EIF4A1P8-201ENST00000394444 1190 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 FANCL-204ENST00000403676 849 ntTSL 3 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 C2orf76-204ENST00000409877 950 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 TRMT112P4-201ENST00000429016 379 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC011998.2-201ENST00000430884 473 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AL035420.2-201ENST00000433587 616 ntTSL 3 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC020658.1-201ENST00000471253 938 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 RN7SL800P-201ENST00000484823 280 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC017091.1-201ENST00000513551 1061 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 MRPS28-207ENST00000521434 585 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC005842.1-201ENST00000537149 678 ntTSL 3 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC007406.2-201ENST00000540868 503 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC112694.1-201ENST00000541939 570 ntTSL 4 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AL162311.2-201ENST00000550416 709 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 PCED1B-AS1-211ENST00000552990 654 ntTSL 3 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 PLCB2-AS1-201ENST00000559520 568 ntTSL 3 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC087761.1-201ENST00000568836 556 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 RN7SL279P-201ENST00000582185 284 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 RN7SL804P-201ENST00000582466 298 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 SKA2-207ENST00000583380 583 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC008569.2-201ENST00000589702 889 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC013553.3-201ENST00000612943 615 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 PKP4-218ENST00000629219 162 ntTSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC245100.4-207ENST00000640776 1082 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 CEACAM1-204ENST00000358394 1484 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 CCDC25-201ENST00000356537 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 LY9-201ENST00000263285 2443 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 AC007614.6-201ENST00000623729 2620 ntBASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NPIPA3F8WFD2 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 GNE-206ENST00000543356 2576 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 GNL3LP1-201ENST00000399458 1643 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 FAM149B1P1-201ENST00000533428 1610 ntBASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 LINC02452-201ENST00000637833 2982 ntTSL 5 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 ARMC8-218ENST00000485396 1920 ntTSL 2 BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 CAVIN4-201ENST00000307584 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 RABGEF1-201ENST00000284957 3733 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 CSTL1-201ENST00000246020 510 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
NPIPA3F8WFD2 TAS2R60-201ENST00000332690 957 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms