Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 KIFC3-216ENST00000564136 3071 ntTSL 210.88□□□□□ -0.673e-7■■□□□ 14.5
PRPF8Q6P2Q9 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC10.75□□□□□ -0.693e-7■■□□□ 14.5
PRPF8Q6P2Q9 DTNB-219ENST00000485845 1988 ntTSL 511.24□□□□□ -0.613e-6■■□□□ 14.5
PRPF8Q6P2Q9 DTNB-218ENST00000482145 731 ntTSL 59.2□□□□□ -0.943e-6■■□□□ 14.5
PRPF8Q6P2Q9 DTNB-217ENST00000481841 567 ntTSL 49.18□□□□□ -0.943e-6■■□□□ 14.5
PRPF8Q6P2Q9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC23.79■■□□□ 1.41e-6■■□□□ 14.5
PRPF8Q6P2Q9 Z97634.1-202ENST00000457760 1044 ntTSL 219.45■□□□□ 0.71e-6■■□□□ 14.5
PRPF8Q6P2Q9 SAC3D1-204ENST00000530213 1563 ntTSL 1 (best)19.33■□□□□ 0.681e-6■■□□□ 14.5
PRPF8Q6P2Q9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.651e-6■■□□□ 14.5
PRPF8Q6P2Q9 SAC3D1-202ENST00000528109 1518 ntTSL 1 (best)18.25■□□□□ 0.511e-6■■□□□ 14.5
PRPF8Q6P2Q9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.42e-16■■□□□ 14.5
PRPF8Q6P2Q9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.351e-6■■□□□ 14.5
PRPF8Q6P2Q9 WNK4-205ENST00000592072 1613 ntTSL 217.2■□□□□ 0.341e-6■■□□□ 14.5
PRPF8Q6P2Q9 SAC3D1-203ENST00000529996 1366 ntTSL 217.18■□□□□ 0.341e-6■■□□□ 14.5
PRPF8Q6P2Q9 NAA10-213ENST00000478177 573 ntTSL 1 (best)16.86■□□□□ 0.292e-6■■□□□ 14.5
PRPF8Q6P2Q9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.262e-6■■□□□ 14.5
PRPF8Q6P2Q9 CTSD-206ENST00000497544 783 ntTSL 216.57■□□□□ 0.241e-6■■□□□ 14.5
PRPF8Q6P2Q9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.172e-16■■□□□ 14.5
PRPF8Q6P2Q9 KIF20A-206ENST00000511638 864 ntTSL 316.1■□□□□ 0.175e-7■■□□□ 14.5
PRPF8Q6P2Q9 ERMP1-205ENST00000487088 2799 ntTSL 516.08■□□□□ 0.162e-6■■□□□ 14.5
PRPF8Q6P2Q9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.03■□□□□ 0.161e-6■■□□□ 14.5
PRPF8Q6P2Q9 CTSD-209ENST00000637158 1200 ntTSL 515.94■□□□□ 0.141e-6■■□□□ 14.5
PRPF8Q6P2Q9 CORO7-210ENST00000572026 586 ntTSL 315.74■□□□□ 0.111e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF408-202ENST00000526410 539 ntTSL 315.59■□□□□ 0.091e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF10-207ENST00000538918 546 ntTSL 315.48■□□□□ 0.071e-6■■□□□ 14.5
PRPF8Q6P2Q9 NAA10-216ENST00000488481 569 ntTSL 215.46■□□□□ 0.072e-6■■□□□ 14.5
PRPF8Q6P2Q9 ALAD-209ENST00000494848 547 ntTSL 215.43■□□□□ 0.061e-6■■□□□ 14.5
PRPF8Q6P2Q9 PGAP3-208ENST00000582276 546 ntTSL 415.22■□□□□ 0.031e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-215ENST00000488494 540 ntTSL 415.11■□□□□ 0.011e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF408-205ENST00000534481 529 ntTSL 415.04■□□□□ -01e-6■■□□□ 14.5
PRPF8Q6P2Q9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.94□□□□□ -0.021e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.031e-6■■□□□ 14.5
PRPF8Q6P2Q9 CTSD-203ENST00000429746 690 ntTSL 314.82□□□□□ -0.041e-6■■□□□ 14.5
PRPF8Q6P2Q9 WNK4-202ENST00000587705 586 ntTSL 414.5□□□□□ -0.091e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-211ENST00000475184 552 ntTSL 414.43□□□□□ -0.11e-6■■□□□ 14.5
PRPF8Q6P2Q9 CTSD-214ENST00000637937 1262 ntTSL 514.42□□□□□ -0.11e-6■■□□□ 14.5
PRPF8Q6P2Q9 SAC3D1-206ENST00000533017 755 ntTSL 314.35□□□□□ -0.111e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.99□□□□□ -0.171e-6■■□□□ 14.5
PRPF8Q6P2Q9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.194e-8■■□□□ 14.5
PRPF8Q6P2Q9 AC068580.4-204ENST00000427721 1007 ntTSL 213.77□□□□□ -0.211e-6■■□□□ 14.5
PRPF8Q6P2Q9 SLC35A3-212ENST00000638929 3035 ntTSL 213.62□□□□□ -0.231e-6■■□□□ 14.5
PRPF8Q6P2Q9 ERMP1-206ENST00000489219 3293 ntTSL 1 (best)13.59□□□□□ -0.232e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-210ENST00000474568 788 ntTSL 513.46□□□□□ -0.261e-6■■□□□ 14.5
PRPF8Q6P2Q9 SLC19A1-205ENST00000443742 777 ntTSL 313.44□□□□□ -0.261e-7■■□□□ 14.5
PRPF8Q6P2Q9 GATD1-204ENST00000465313 446 ntTSL 313.31□□□□□ -0.281e-12■■□□□ 14.5
PRPF8Q6P2Q9 MGST2-203ENST00000503816 1780 ntTSL 513.31□□□□□ -0.281e-6■■□□□ 14.5
PRPF8Q6P2Q9 ITGB1-204ENST00000417122 569 ntTSL 413.26□□□□□ -0.291e-6■■□□□ 14.5
PRPF8Q6P2Q9 ERMP1-203ENST00000462592 3554 ntTSL 213.02□□□□□ -0.332e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.9□□□□□ -0.351e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-216ENST00000551305 1356 ntTSL 1 (best)12.9□□□□□ -0.351e-6■■□□□ 14.5
PRPF8Q6P2Q9 TALDO1-206ENST00000530666 587 ntTSL 212.77□□□□□ -0.361e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF10-208ENST00000540609 648 ntTSL 312.68□□□□□ -0.381e-6■■□□□ 14.5
PRPF8Q6P2Q9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.41e-6■■□□□ 14.5
PRPF8Q6P2Q9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.53□□□□□ -0.41e-6■■□□□ 14.5
PRPF8Q6P2Q9 ADAP1-209ENST00000463358 595 ntTSL 312.51□□□□□ -0.411e-6■■□□□ 14.5
PRPF8Q6P2Q9 CEP170B-201ENST00000251181 846 ntTSL 212.49□□□□□ -0.411e-6■■□□□ 14.5
PRPF8Q6P2Q9 MTG2-208ENST00000471962 638 ntTSL 312.23□□□□□ -0.451e-6■■□□□ 14.5
PRPF8Q6P2Q9 AKR1B1-204ENST00000462784 598 ntTSL 212.17□□□□□ -0.461e-6■■□□□ 14.5
PRPF8Q6P2Q9 CTIF-205ENST00000587860 2940 ntTSL 212.03□□□□□ -0.481e-6■■□□□ 14.5
PRPF8Q6P2Q9 COPS7B-219ENST00000474042 914 ntTSL 311.7□□□□□ -0.544e-6■■□□□ 14.5
PRPF8Q6P2Q9 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.553e-7■■□□□ 14.5
PRPF8Q6P2Q9 SPOUT1-204ENST00000467582 898 ntTSL 211.49□□□□□ -0.572e-16■■□□□ 14.5
PRPF8Q6P2Q9 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.581e-6■■□□□ 14.5
PRPF8Q6P2Q9 GALK2-219ENST00000560528 620 ntTSL 411.38□□□□□ -0.591e-6■■□□□ 14.5
PRPF8Q6P2Q9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.35□□□□□ -0.591e-6■■□□□ 14.5
PRPF8Q6P2Q9 GALK2-213ENST00000559580 655 ntTSL 511.31□□□□□ -0.61e-6■■□□□ 14.5
PRPF8Q6P2Q9 MGST2-202ENST00000502587 663 ntTSL 211.3□□□□□ -0.61e-6■■□□□ 14.5
PRPF8Q6P2Q9 ACTR6-213ENST00000553038 2045 ntTSL 1 (best)11.1□□□□□ -0.631e-6■■□□□ 14.5
PRPF8Q6P2Q9 ADAP1-210ENST00000477906 579 ntTSL 311.04□□□□□ -0.641e-6■■□□□ 14.5
PRPF8Q6P2Q9 ADAP1-202ENST00000435943 559 ntTSL 510.96□□□□□ -0.651e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF791-206ENST00000600752 576 ntTSL 210.96□□□□□ -0.651e-6■■□□□ 14.5
PRPF8Q6P2Q9 TMEM106C-209ENST00000548640 581 ntTSL 310.7□□□□□ -0.71e-6■■□□□ 14.5
PRPF8Q6P2Q9 MCF2L-225ENST00000480321 5727 ntTSL 1 (best)10.67□□□□□ -0.71e-6■■□□□ 14.5
PRPF8Q6P2Q9 POP4-213ENST00000592759 550 ntTSL 410.57□□□□□ -0.721e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF10-204ENST00000536704 531 ntTSL 410.55□□□□□ -0.721e-6■■□□□ 14.5
PRPF8Q6P2Q9 CCDC47-206ENST00000584112 588 ntTSL 210.42□□□□□ -0.741e-6■■□□□ 14.5
PRPF8Q6P2Q9 SLC25A28-202ENST00000434701 1005 ntTSL 510.36□□□□□ -0.752e-16■■□□□ 14.5
PRPF8Q6P2Q9 GATD1-215ENST00000533960 299 ntTSL 210.21□□□□□ -0.771e-12■■□□□ 14.5
PRPF8Q6P2Q9 NCOA7-204ENST00000417494 765 ntTSL 210.18□□□□□ -0.781e-6■■□□□ 14.5
PRPF8Q6P2Q9 NCOA7-210ENST00000453302 581 ntTSL 310.1□□□□□ -0.791e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF791-205ENST00000598225 704 ntTSL 410.09□□□□□ -0.791e-6■■□□□ 14.5
PRPF8Q6P2Q9 INPPL1-215ENST00000544806 547 ntTSL 410.06□□□□□ -0.81e-6■■□□□ 14.5
PRPF8Q6P2Q9 TRAK2-204ENST00000451703 646 ntTSL 310.04□□□□□ -0.81e-6■■□□□ 14.5
PRPF8Q6P2Q9 SNRPB2-203ENST00000478522 540 ntTSL 210.02□□□□□ -0.81e-6■■□□□ 14.5
PRPF8Q6P2Q9 SCAP-208ENST00000448217 550 ntTSL 49.81□□□□□ -0.841e-6■■□□□ 14.5
PRPF8Q6P2Q9 FTSJ3-213ENST00000583901 867 ntTSL 29.61□□□□□ -0.871e-6■■□□□ 14.5
PRPF8Q6P2Q9 COPS7B-212ENST00000436564 474 ntTSL 39.6□□□□□ -0.874e-6■■□□□ 14.5
PRPF8Q6P2Q9 PGAP3-209ENST00000584620 804 ntTSL 39.59□□□□□ -0.871e-6■■□□□ 14.5
PRPF8Q6P2Q9 CORO7-215ENST00000572518 546 ntTSL 49.47□□□□□ -0.891e-6■■□□□ 14.5
PRPF8Q6P2Q9 TNKS-207ENST00000518635 503 ntTSL 59.45□□□□□ -0.91e-6■■□□□ 14.5
PRPF8Q6P2Q9 FGFR1-236ENST00000531196 842 ntTSL 39.42□□□□□ -0.91e-6■■□□□ 14.5
PRPF8Q6P2Q9 ANXA7-203ENST00000394847 648 ntTSL 59.38□□□□□ -0.911e-6■■□□□ 14.5
PRPF8Q6P2Q9 MRPL35-204ENST00000605125 833 ntTSL 2 BASIC9.35□□□□□ -0.911e-6■■□□□ 14.5
PRPF8Q6P2Q9 RPF2-203ENST00000441448 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.921e-6■■□□□ 14.5
PRPF8Q6P2Q9 MCF2L-231ENST00000494043 896 ntTSL 39.27□□□□□ -0.921e-6■■□□□ 14.5
PRPF8Q6P2Q9 PGAP3-210ENST00000584856 538 ntTSL 49.26□□□□□ -0.931e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF791-203ENST00000498389 294 ntTSL 29.18□□□□□ -0.941e-6■■□□□ 14.5
PRPF8Q6P2Q9 PPCDC-203ENST00000562192 313 ntTSL 49.16□□□□□ -0.941e-6■■□□□ 14.5
PRPF8Q6P2Q9 ZNF10-210ENST00000543271 559 ntTSL 49.15□□□□□ -0.941e-6■■□□□ 14.5
PRPF8Q6P2Q9 FTSJ3-212ENST00000583202 908 ntTSL 38.86□□□□□ -0.991e-6■■□□□ 14.5
Retrieved 100 of 73,762 protein–RNA pairs in 1776.9 ms