Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.33■■□□□ 1.33
PTCH2Q9Y6C5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PTCH2Q9Y6C5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
PTCH2Q9Y6C5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PTCH2Q9Y6C5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PTCH2Q9Y6C5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PTCH2Q9Y6C5 HTR7P1-201ENST00000538670 1336 ntBASIC23.33■■□□□ 1.32
PTCH2Q9Y6C5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 RBM17P1-201ENST00000453646 1190 ntBASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 NTF6B-201ENST00000591913 560 ntBASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTCH2Q9Y6C5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
PTCH2Q9Y6C5 AC079598.2-202ENST00000546624 1451 ntBASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCH2Q9Y6C5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCH2Q9Y6C5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCH2Q9Y6C5 AL390719.1-204ENST00000412397 1219 ntBASIC23.29■■□□□ 1.32
PTCH2Q9Y6C5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCH2Q9Y6C5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.29■■□□□ 1.32
PTCH2Q9Y6C5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCH2Q9Y6C5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
PTCH2Q9Y6C5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC23.29■■□□□ 1.32
PTCH2Q9Y6C5 AP000525.1-201ENST00000608286 694 ntBASIC23.29■■□□□ 1.32
PTCH2Q9Y6C5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 LINC01568-207ENST00000641790 1380 ntBASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 TERF1P1-201ENST00000311003 1181 ntBASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCH2Q9Y6C5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCH2Q9Y6C5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCH2Q9Y6C5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PTCH2Q9Y6C5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCH2Q9Y6C5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.27■■□□□ 1.32
PTCH2Q9Y6C5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCH2Q9Y6C5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PTCH2Q9Y6C5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms