Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 UBE2SP1-201ENST00000450587 669 ntBASIC26.3■■□□□ 1.8
USP16Q9Y5T5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP16Q9Y5T5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 AC008550.1-201ENST00000511500 884 ntBASIC26.29■■□□□ 1.8
USP16Q9Y5T5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
USP16Q9Y5T5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP16Q9Y5T5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
USP16Q9Y5T5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP16Q9Y5T5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP16Q9Y5T5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
USP16Q9Y5T5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.28■■□□□ 1.8
USP16Q9Y5T5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.28■■□□□ 1.8
USP16Q9Y5T5 AC069544.1-201ENST00000609399 999 ntBASIC26.28■■□□□ 1.8
USP16Q9Y5T5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.28■■□□□ 1.8
USP16Q9Y5T5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
USP16Q9Y5T5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.27■■□□□ 1.8
USP16Q9Y5T5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 POM121L13P-201ENST00000422362 380 ntBASIC26.26■■□□□ 1.79
USP16Q9Y5T5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP16Q9Y5T5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 AL356652.1-201ENST00000615962 565 ntBASIC26.25■■□□□ 1.79
USP16Q9Y5T5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 EP400NL-214ENST00000641289 2402 ntBASIC26.25■■□□□ 1.79
USP16Q9Y5T5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USP16Q9Y5T5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms