Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 AC008687.6-201ENST00000596318 630 ntBASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHGA4Q9Y5G9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGA4Q9Y5G9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 AC008175.2-201ENST00000612840 297 ntBASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 AC010536.3-201ENST00000620306 533 ntBASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA4Q9Y5G9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 POU5F1P3-201ENST00000428824 1078 ntBASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 Z98882.1-201ENST00000622160 2253 ntBASIC20.13■□□□□ 0.81
PCDHGA4Q9Y5G9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 POU5F1P4-201ENST00000413175 1085 ntBASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA4Q9Y5G9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms