Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 AL359736.2-201ENST00000621992 437 ntBASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGA9Q9Y5G4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA9Q9Y5G4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 MIR718-201ENST00000390190 70 ntBASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 FAM99A-202ENST00000538190 1989 ntBASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA9Q9Y5G4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDHGA9Q9Y5G4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 PNMA6B-201ENST00000538162 1200 ntBASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA9Q9Y5G4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA9Q9Y5G4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms