Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB1Q9Y5G3 AP006587.3-201ENST00000525742 1516 ntBASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 AC010525.1-201ENST00000585559 441 ntBASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB1Q9Y5G3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 MIR4466-201ENST00000606121 54 ntBASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 AL138724.1-201ENST00000606771 1088 ntBASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB1Q9Y5G3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGB1Q9Y5G3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 AC125437.2-201ENST00000625180 2167 ntBASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB1Q9Y5G3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms