Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 AC006058.3-201ENST00000606217 1069 ntBASIC22.55■■□□□ 1.2
PCDHGC5Q9Y5F6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.55■■□□□ 1.2
PCDHGC5Q9Y5F6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC5Q9Y5F6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC5Q9Y5F6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC5Q9Y5F6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGC5Q9Y5F6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHGC5Q9Y5F6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHGC5Q9Y5F6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC5Q9Y5F6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC5Q9Y5F6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC5Q9Y5F6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 AC091874.3-201ENST00000512672 1195 ntBASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC5Q9Y5F6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 AL596275.1-201ENST00000423464 877 ntBASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC5Q9Y5F6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 AC010980.2-201ENST00000587099 1412 ntBASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 AC128676.1-201ENST00000454392 318 ntBASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 AL049796.1-201ENST00000565336 1766 ntBASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC5Q9Y5F6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
PCDHGC5Q9Y5F6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 AC003102.1-202ENST00000563394 1796 ntBASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
PCDHGC5Q9Y5F6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 RBM17P2-201ENST00000616397 1405 ntBASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGC5Q9Y5F6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms