Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB1Q9Y5F3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 MKRN4P-201ENST00000444706 1521 ntBASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 AC068338.2-201ENST00000563278 1430 ntBASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB1Q9Y5F3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 PRORSD1P-201ENST00000295112 541 ntBASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 TERF1P5-201ENST00000477545 1207 ntBASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB1Q9Y5F3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 RBM17P2-201ENST00000616397 1405 ntBASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHB1Q9Y5F3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHB1Q9Y5F3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB1Q9Y5F3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms