Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 RARRES2P4-201ENST00000514074 484 ntBASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 AL162412.1-201ENST00000567129 965 ntBASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 AC016405.3-201ENST00000607710 860 ntBASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB9Q9Y5E1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB9Q9Y5E1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB9Q9Y5E1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB9Q9Y5E1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 AC097658.1-201ENST00000475555 843 ntBASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 AC092118.2-201ENST00000613495 667 ntBASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB9Q9Y5E1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 ESRRAP1-201ENST00000400596 1257 ntBASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 AC007322.3-201ENST00000426526 701 ntBASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 AL158047.1-201ENST00000445918 881 ntBASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB9Q9Y5E1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 BX276092.2-201ENST00000417668 665 ntBASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 AC142381.4-202ENST00000563973 229 ntBASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB9Q9Y5E1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 AL512625.2-201ENST00000417533 625 ntBASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 AC011484.1-201ENST00000377652 1995 ntBASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 CLDN5-201ENST00000403084 2357 ntBASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB9Q9Y5E1 AC121338.2-201ENST00000622535 1744 ntBASIC20.78■□□□□ 0.92
PCDHB9Q9Y5E1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB9Q9Y5E1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB9Q9Y5E1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB9Q9Y5E1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB9Q9Y5E1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB9Q9Y5E1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms