Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 AP006294.2-201ENST00000641667 209 ntBASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CTDP1Q9Y5B0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CTDP1Q9Y5B0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CTDP1Q9Y5B0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CTDP1Q9Y5B0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.73■■□□□ 1.39
CTDP1Q9Y5B0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.73■■□□□ 1.39
CTDP1Q9Y5B0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.73■■□□□ 1.39
CTDP1Q9Y5B0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
CTDP1Q9Y5B0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CTDP1Q9Y5B0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.73■■□□□ 1.39
CTDP1Q9Y5B0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 RPS2P52-201ENST00000469610 820 ntBASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CTDP1Q9Y5B0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 AC073648.6-201ENST00000641589 218 ntBASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.71■■□□□ 1.39
CTDP1Q9Y5B0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.7■■□□□ 1.39
CTDP1Q9Y5B0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.39
CTDP1Q9Y5B0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 AC098590.1-201ENST00000468126 897 ntBASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.7■■□□□ 1.38
CTDP1Q9Y5B0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 KRT17P3-201ENST00000420566 1262 ntBASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 GCSHP5-201ENST00000443090 522 ntBASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CTDP1Q9Y5B0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CTDP1Q9Y5B0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CTDP1Q9Y5B0 AC087633.2-202ENST00000565166 1439 ntBASIC23.68■■□□□ 1.38
CTDP1Q9Y5B0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CTDP1Q9Y5B0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CTDP1Q9Y5B0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.68■■□□□ 1.38
CTDP1Q9Y5B0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CTDP1Q9Y5B0 UNC93B4-201ENST00000505679 747 ntBASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms