Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.58■□□□□ 0.89
PKP3Q9Y446 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.58■□□□□ 0.89
PKP3Q9Y446 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.58■□□□□ 0.89
PKP3Q9Y446 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.58■□□□□ 0.89
PKP3Q9Y446 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP3Q9Y446 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.58■□□□□ 0.89
PKP3Q9Y446 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PKP3Q9Y446 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PKP3Q9Y446 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PKP3Q9Y446 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.58■□□□□ 0.88
PKP3Q9Y446 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PKP3Q9Y446 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP3Q9Y446 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP3Q9Y446 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PKP3Q9Y446 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PKP3Q9Y446 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PKP3Q9Y446 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PKP3Q9Y446 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP3Q9Y446 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PKP3Q9Y446 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.57■□□□□ 0.88
PKP3Q9Y446 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.57■□□□□ 0.88
PKP3Q9Y446 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PKP3Q9Y446 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.57■□□□□ 0.88
PKP3Q9Y446 FAM21FP-204ENST00000608637 956 ntBASIC20.57■□□□□ 0.88
PKP3Q9Y446 AC073111.5-205ENST00000641717 521 ntBASIC20.57■□□□□ 0.88
PKP3Q9Y446 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP3Q9Y446 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP3Q9Y446 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.57■□□□□ 0.88
PKP3Q9Y446 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PKP3Q9Y446 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PKP3Q9Y446 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP3Q9Y446 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP3Q9Y446 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PKP3Q9Y446 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP3Q9Y446 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKP3Q9Y446 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKP3Q9Y446 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKP3Q9Y446 AC068338.2-201ENST00000563278 1430 ntBASIC20.56■□□□□ 0.88
PKP3Q9Y446 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKP3Q9Y446 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PKP3Q9Y446 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PKP3Q9Y446 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PKP3Q9Y446 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.56■□□□□ 0.88
PKP3Q9Y446 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.56■□□□□ 0.88
PKP3Q9Y446 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PKP3Q9Y446 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PKP3Q9Y446 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.56■□□□□ 0.88
PKP3Q9Y446 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.56■□□□□ 0.88
PKP3Q9Y446 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PKP3Q9Y446 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PKP3Q9Y446 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PKP3Q9Y446 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP3Q9Y446 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP3Q9Y446 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP3Q9Y446 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP3Q9Y446 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP3Q9Y446 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 AC008694.1-202ENST00000636953 945 ntBASIC20.55■□□□□ 0.88
PKP3Q9Y446 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP3Q9Y446 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP3Q9Y446 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PKP3Q9Y446 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP3Q9Y446 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP3Q9Y446 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PKP3Q9Y446 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP3Q9Y446 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.54■□□□□ 0.88
PKP3Q9Y446 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP3Q9Y446 AC069236.1-201ENST00000604339 616 ntBASIC20.54■□□□□ 0.88
PKP3Q9Y446 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP3Q9Y446 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP3Q9Y446 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PKP3Q9Y446 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP3Q9Y446 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.54■□□□□ 0.88
PKP3Q9Y446 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.54■□□□□ 0.88
PKP3Q9Y446 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PKP3Q9Y446 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP3Q9Y446 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PKP3Q9Y446 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.53■□□□□ 0.88
PKP3Q9Y446 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.53■□□□□ 0.88
PKP3Q9Y446 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.53■□□□□ 0.88
PKP3Q9Y446 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
PKP3Q9Y446 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 CYP2T1P-201ENST00000432607 1285 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms