Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FNDC3AQ9Y2H6 POU5F1P4-201ENST00000413175 1085 ntBASIC20.9■□□□□ 0.94
FNDC3AQ9Y2H6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.9■□□□□ 0.94
FNDC3AQ9Y2H6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.9■□□□□ 0.94
FNDC3AQ9Y2H6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.9■□□□□ 0.94
FNDC3AQ9Y2H6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FNDC3AQ9Y2H6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
FNDC3AQ9Y2H6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FNDC3AQ9Y2H6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FNDC3AQ9Y2H6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
FNDC3AQ9Y2H6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
FNDC3AQ9Y2H6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
FNDC3AQ9Y2H6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
FNDC3AQ9Y2H6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.89■□□□□ 0.94
FNDC3AQ9Y2H6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 OR10C1-204ENST00000622521 1039 ntBASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FNDC3AQ9Y2H6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 AC092118.2-201ENST00000613495 667 ntBASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 AC008694.1-202ENST00000636953 945 ntBASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FNDC3AQ9Y2H6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 AC069236.1-201ENST00000604339 616 ntBASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FNDC3AQ9Y2H6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 RARRES2P4-201ENST00000514074 484 ntBASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FNDC3AQ9Y2H6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC3AQ9Y2H6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC3AQ9Y2H6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC3AQ9Y2H6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC3AQ9Y2H6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.85■□□□□ 0.93
FNDC3AQ9Y2H6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.85■□□□□ 0.93
FNDC3AQ9Y2H6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC3AQ9Y2H6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.85■□□□□ 0.93
FNDC3AQ9Y2H6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FNDC3AQ9Y2H6 BX276092.2-201ENST00000417668 665 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms