Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CDK11AQ9UQ88 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CDK11AQ9UQ88 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CDK11AQ9UQ88 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
CDK11AQ9UQ88 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
CDK11AQ9UQ88 AC110285.5-201ENST00000611501 352 ntBASIC31.89■■■□□ 2.7
CDK11AQ9UQ88 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC31.89■■■□□ 2.7
CDK11AQ9UQ88 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
CDK11AQ9UQ88 MFF-203ENST00000349901 1716 ntTSL 2 BASIC31.89■■■□□ 2.69
CDK11AQ9UQ88 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
CDK11AQ9UQ88 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 GOLGA2P6-201ENST00000340929 2049 ntBASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 BX088651.1-201ENST00000540551 451 ntBASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 REXO2-216ENST00000544196 452 ntTSL 3 BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 LINC01023-201ENST00000606054 436 ntBASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 AC006557.6-201ENST00000623071 864 ntBASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 AL049637.2-201ENST00000641778 930 ntBASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
CDK11AQ9UQ88 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 AC242852.2-201ENST00000615738 1807 ntBASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 EXOC3-AS1-202ENST00000623673 1663 ntBASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 AL390719.1-204ENST00000412397 1219 ntBASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CDK11AQ9UQ88 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC31.86■■■□□ 2.69
CDK11AQ9UQ88 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CDK11AQ9UQ88 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CDK11AQ9UQ88 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
CDK11AQ9UQ88 RER1-204ENST00000378518 522 ntTSL 3 BASIC31.86■■■□□ 2.69
CDK11AQ9UQ88 FAM210CP-201ENST00000445714 574 ntBASIC31.86■■■□□ 2.69
CDK11AQ9UQ88 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC31.86■■■□□ 2.69
CDK11AQ9UQ88 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CDK11AQ9UQ88 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC31.86■■■□□ 2.69
CDK11AQ9UQ88 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 MOK-233ENST00000524214 1539 ntTSL 2 BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 ME2-208ENST00000638937 2471 ntTSL 5 BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 TK2-204ENST00000525974 1178 ntTSL 2 BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CDK11AQ9UQ88 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 TSPY7P-201ENST00000431358 1114 ntBASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDK11AQ9UQ88 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
CDK11AQ9UQ88 KRASP1-201ENST00000407852 552 ntBASIC31.83■■■□□ 2.69
CDK11AQ9UQ88 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC31.83■■■□□ 2.69
CDK11AQ9UQ88 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
CDK11AQ9UQ88 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC31.83■■■□□ 2.69
CDK11AQ9UQ88 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CDK11AQ9UQ88 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CDK11AQ9UQ88 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
CDK11AQ9UQ88 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CDK11AQ9UQ88 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.69
CDK11AQ9UQ88 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CDK11AQ9UQ88 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms