Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
ZC3H4Q9UPT8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.01■■□□□ 1.59
ZC3H4Q9UPT8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 AC087633.2-202ENST00000565166 1439 ntBASIC25■■□□□ 1.59
ZC3H4Q9UPT8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 DUX4L26-201ENST00000489078 1255 ntBASIC25■■□□□ 1.59
ZC3H4Q9UPT8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 NTF6B-201ENST00000591913 560 ntBASIC25■■□□□ 1.59
ZC3H4Q9UPT8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ZC3H4Q9UPT8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 LINC01568-207ENST00000641790 1380 ntBASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.99■■□□□ 1.59
ZC3H4Q9UPT8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 KRT18P22-201ENST00000402024 1347 ntBASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 HTR7P1-201ENST00000538670 1336 ntBASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 UNC93B2-201ENST00000285383 730 ntBASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 AL390719.1-204ENST00000412397 1219 ntBASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 AL137013.1-201ENST00000432946 1228 ntBASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 KRT16P5-201ENST00000455284 522 ntBASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 AC006557.6-201ENST00000623071 864 ntBASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ZC3H4Q9UPT8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 NUDT16P1-203ENST00000513809 620 ntBASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 KRT8P9-201ENST00000558927 1449 ntBASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
ZC3H4Q9UPT8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 AC079598.2-202ENST00000546624 1451 ntBASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 AC087388.1-201ENST00000571370 1112 ntBASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 Six3os1_6.1-201ENST00000620790 196 ntBASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.96■■□□□ 1.59
ZC3H4Q9UPT8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms