Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 AC027702.1-201ENST00000563810 1770 ntBASIC21.74■■□□□ 1.07
CDH9Q9ULB4 AF106564.1-201ENST00000607058 2553 ntBASIC21.74■■□□□ 1.07
CDH9Q9ULB4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH9Q9ULB4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 AL356652.1-201ENST00000615962 565 ntBASIC21.73■■□□□ 1.07
CDH9Q9ULB4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH9Q9ULB4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH9Q9ULB4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH9Q9ULB4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.7■■□□□ 1.07
CDH9Q9ULB4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH9Q9ULB4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH9Q9ULB4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.7■■□□□ 1.06
CDH9Q9ULB4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH9Q9ULB4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH9Q9ULB4 RNA5SP413-201ENST00000516373 109 ntBASIC21.7■■□□□ 1.06
CDH9Q9ULB4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
CDH9Q9ULB4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH9Q9ULB4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH9Q9ULB4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH9Q9ULB4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 MIR2861-201ENST00000636310 90 ntBASIC21.69■■□□□ 1.06
CDH9Q9ULB4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH9Q9ULB4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms