Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 AC010542.4-201ENST00000563151 1910 ntBASIC21.75■■□□□ 1.07
CDH22Q9UJ99 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 TSPY7P-201ENST00000431358 1114 ntBASIC21.75■■□□□ 1.07
CDH22Q9UJ99 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH22Q9UJ99 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH22Q9UJ99 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDH22Q9UJ99 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 TSPY15P-201ENST00000457163 923 ntBASIC21.72■■□□□ 1.07
CDH22Q9UJ99 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH22Q9UJ99 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CDH22Q9UJ99 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDH22Q9UJ99 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDH22Q9UJ99 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH22Q9UJ99 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH22Q9UJ99 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.7■■□□□ 1.06
CDH22Q9UJ99 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.7■■□□□ 1.06
CDH22Q9UJ99 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms