Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EBF1Q9UH73 KRT18P68-201ENST00000392293 1000 ntBASIC20.9■□□□□ 0.94
EBF1Q9UH73 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.9■□□□□ 0.94
EBF1Q9UH73 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.9■□□□□ 0.94
EBF1Q9UH73 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
EBF1Q9UH73 RN7SL471P-201ENST00000580476 299 ntBASIC20.9■□□□□ 0.94
EBF1Q9UH73 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.9■□□□□ 0.94
EBF1Q9UH73 FAM197Y4-202ENST00000622692 608 ntBASIC20.9■□□□□ 0.94
EBF1Q9UH73 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
EBF1Q9UH73 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.9■□□□□ 0.94
EBF1Q9UH73 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
EBF1Q9UH73 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EBF1Q9UH73 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EBF1Q9UH73 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
EBF1Q9UH73 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
EBF1Q9UH73 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EBF1Q9UH73 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
EBF1Q9UH73 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.89■□□□□ 0.93
EBF1Q9UH73 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.89■□□□□ 0.93
EBF1Q9UH73 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF1Q9UH73 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF1Q9UH73 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF1Q9UH73 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF1Q9UH73 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.89■□□□□ 0.93
EBF1Q9UH73 C1QBPP2-201ENST00000528754 825 ntBASIC20.89■□□□□ 0.93
EBF1Q9UH73 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.89■□□□□ 0.93
EBF1Q9UH73 MIR4497-201ENST00000583208 89 ntBASIC20.89■□□□□ 0.93
EBF1Q9UH73 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
EBF1Q9UH73 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF1Q9UH73 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF1Q9UH73 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF1Q9UH73 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF1Q9UH73 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF1Q9UH73 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF1Q9UH73 AC092368.3-202ENST00000574180 1591 ntBASIC20.89■□□□□ 0.93
EBF1Q9UH73 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.89■□□□□ 0.93
EBF1Q9UH73 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EBF1Q9UH73 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.88■□□□□ 0.93
EBF1Q9UH73 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF1Q9UH73 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF1Q9UH73 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
EBF1Q9UH73 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EBF1Q9UH73 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
EBF1Q9UH73 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF1Q9UH73 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.88■□□□□ 0.93
EBF1Q9UH73 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF1Q9UH73 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.88■□□□□ 0.93
EBF1Q9UH73 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EBF1Q9UH73 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
EBF1Q9UH73 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EBF1Q9UH73 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF1Q9UH73 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF1Q9UH73 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF1Q9UH73 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EBF1Q9UH73 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.88■□□□□ 0.93
EBF1Q9UH73 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
EBF1Q9UH73 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EBF1Q9UH73 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
EBF1Q9UH73 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.87■□□□□ 0.93
EBF1Q9UH73 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EBF1Q9UH73 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.87■□□□□ 0.93
EBF1Q9UH73 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
EBF1Q9UH73 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EBF1Q9UH73 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
EBF1Q9UH73 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EBF1Q9UH73 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.87■□□□□ 0.93
EBF1Q9UH73 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
EBF1Q9UH73 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.87■□□□□ 0.93
EBF1Q9UH73 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.87■□□□□ 0.93
EBF1Q9UH73 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
EBF1Q9UH73 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF1Q9UH73 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EBF1Q9UH73 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EBF1Q9UH73 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF1Q9UH73 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF1Q9UH73 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF1Q9UH73 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.86■□□□□ 0.93
EBF1Q9UH73 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF1Q9UH73 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
EBF1Q9UH73 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
EBF1Q9UH73 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EBF1Q9UH73 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EBF1Q9UH73 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.85■□□□□ 0.93
EBF1Q9UH73 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EBF1Q9UH73 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EBF1Q9UH73 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
EBF1Q9UH73 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms